Transcript: AT3G11950.4 AT3G11950-201
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Description
TRAF-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:820368 ]
Show/hide columns (1 hidden)
AT3G11950-203 AT3G11950.3 2467 572aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
A0A384L4W9 Q9SF04 - A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.html Ensembl Canonical, AT3G11950-205 AT3G11950.5 2369 572aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
A0A384L4W9 Q9SF04 - - AT3G11950-201 AT3G11950.4 2170 572aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
A0A384L4W9 Q9SF04 - - AT3G11950-202 AT3G11950.2 2096 572aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
A0A384L4W9 Q9SF04 - - AT3G11950-204 AT3G11950.1 2038 572aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
A0A384L4W9 Q9SF04 - -
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1 ATAAAAAAATAAAAATAAAGGAGGAGAGAGTCCGTTTTTAATAGAAGAGGCGACGAAGTT 60
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61 GTGGTAAAAGAGAAAAAGAGACCCGTTTATTGCGCCAAAACCAGAGAGGTGCTTCTCTCT 120
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121 CTCTCTCTTTCTCTCATTCCATTCTTGTTCCATTTTGATCTCACCGTCAGATTTCCTTAC 180
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181 AGGCTTTCGTTAGTTCCTTTCTCCGATTTGTCATTGTCTGTTTAGGACACGATTTCTTTC 240
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241 TAGG ACGATTTTTGATATACAGGCA ATG GAT CCT CCT GTG TCG GAT CTT GAG AGT ATT GA 300
.........................ATGGATCCTCCTGTGTCGGATCTTGAGAGTATTGA 35
.........................-M--D--P--P--V--S--D--L--E--S--I--E 12
301 A GAT CAG AAA GAA GGA GGA CCT TCC TTT CAC TGT GAT CTT TAC GAT ACA CAA GTA GTT CA 360
36 AGATCAGAAAGAAGGAGGACCTTCCTTTCACTGTGATCTTTACGATACACAAGTAGTTCA 95
12 --D--Q--K--E--G--G--P--S--F--H--C--D--L--Y--D--T--Q--V--V--H 32
361 C AAG ATT GCT CAG GTT TTT CTC CCT GGT TTA GCC ACT GCT TGT GTC GAT AAC ACT ACC GG 420
96 CAAGATTGCTCAGGTTTTTCTCCCTGGTTTAGCCACTGCTTGTGTCGATAACACTACCGG 155
32 --K--I--A--Q--V--F--L--P--G--L--A--T--A--C--V--D--N--T--T--G 52
421 A GAT ATC TTC AGG AGT CCT GGT TCT GTT GCT GCT GAC ATT CGA AAA GAA ATG ATA GAG TA 480
156 AGATATCTTCAGGAGTCCTGGTTCTGTTGCTGCTGACATTCGAAAAGAAATGATAGAGTA 215
52 --D--I--F--R--S--P--G--S--V--A--A--D--I--R--K--E--M--I--E--Y 72
481 C TTG ACT CGT AGA AGC GAA ACC TTT GTG GCT GAA CAC ATT GTT CTT CAA GGA GGT TCT GA 540
216 CTTGACTCGTAGAAGCGAAACCTTTGTGGCTGAACACATTGTTCTTCAAGGAGGTTCTGA 275
72 --L--T--R--R--S--E--T--F--V--A--E--H--I--V--L--Q--G--G--S--E 92
541 G ATT GAA GCT TCT CAT GAT CCT TTT GAC ATT ATA TCT GAT TTC ATC GAT GAT TTC GCC AC 600
276 GATTGAAGCTTCTCATGATCCTTTTGACATTATATCTGATTTCATCGATGATTTCGCCAC 335
92 --I--E--A--S--H--D--P--F--D--I--I--S--D--F--I--D--D--F--A--T 112
601 T TCT AAG CGG AAT TTG TTC AGC CGG GTT TCG GGT TGG ATG CTT AGC GAA AGG AGA GAA GA 660
336 TTCTAAGCGGAATTTGTTCAGCCGGGTTTCGGGTTGGATGCTTAGCGAAAGGAGAGAAGA 395
112 --S--K--R--N--L--F--S--R--V--S--G--W--M--L--S--E--R--R--E--D 132
661 T AAT ATC GAT GAT TTC GCG CAA GAG ATG GAG ATA AGC GGG TTT TGG TTG ACT GAT CAT AG 720
396 TAATATCGATGATTTCGCGCAAGAGATGGAGATAAGCGGGTTTTGGTTGACTGATCATAG 455
132 --N--I--D--D--F--A--Q--E--M--E--I--S--G--F--W--L--T--D--H--R 152
721 A GAA GGT ATC GCT CAG ACT TTG CTT AAA AAC GTT GAT TTT AAA AGC AGT GCA CAT TGT GA 780
456 AGAAGGTATCGCTCAGACTTTGCTTAAAAACGTTGATTTTAAAAGCAGTGCACATTGTGA 515
152 --E--G--I--A--Q--T--L--L--K--N--V--D--F--K--S--S--A--H--C--E 172
781 G ATG AAA TTC CAA ACC GAA GGA GAA CTC GCC GAG CAC GCC ATG AAT TGT GGG TAT AGA AC 840
516 GATGAAATTCCAAACCGAAGGAGAACTCGCCGAGCACGCCATGAATTGTGGGTATAGAAC 575
172 --M--K--F--Q--T--E--G--E--L--A--E--H--A--M--N--C--G--Y--R--T 192
841 A ATG AAC TGT GAG AAT GAG GGT TGT ACT GCG GTG TTT TGT GCG AAT CAG ATG GAG AAT CA 900
576 AATGAACTGTGAGAATGAGGGTTGTACTGCGGTGTTTTGTGCGAATCAGATGGAGAATCA 635
192 --M--N--C--E--N--E--G--C--T--A--V--F--C--A--N--Q--M--E--N--H 212
901 C GAT TCT GTT TGC CCG TTC AAG ATC ATT CCG TGT GAG CAG AAC TGC TCA GAG AGT ATC AT 960
636 CGATTCTGTTTGCCCGTTCAAGATCATTCCGTGTGAGCAGAACTGCTCAGAGAGTATCAT 695
212 --D--S--V--C--P--F--K--I--I--P--C--E--Q--N--C--S--E--S--I--M 232
961 G AGA CGT GAT ATG GAT AGG CAT TGT ATA ACC GTA TGT CCT ATG AAA CTT GTC AAC TGT CC 1020
696 GAGACGTGATATGGATAGGCATTGTATAACCGTATGTCCTATGAAACTTGTCAACTGTCC 755
232 --R--R--D--M--D--R--H--C--I--T--V--C--P--M--K--L--V--N--C--P 252
1021 A TTT CAT TCT GTT GGT TGT CTC TCT GAT GTA CAT CAA TGT GAG GTC CAA CAA CAT CAT TT 1080
756 ATTTCATTCTGTTGGTTGTCTCTCTGATGTACATCAATGTGAGGTCCAACAACATCATTT 815
252 --F--H--S--V--G--C--L--S--D--V--H--Q--C--E--V--Q--Q--H--H--L 272
1081 G GAT AAT GTT AGC TCT CAT TTG ATG TAC ATT CTT CGG AGT ATT TAC AAG GAA GCA TCT CT 1140
816 GGATAATGTTAGCTCTCATTTGATGTACATTCTTCGGAGTATTTACAAGGAAGCATCTCT 875
272 --D--N--V--S--S--H--L--M--Y--I--L--R--S--I--Y--K--E--A--S--L 292
1141 G GAT GAT CTC AAA CCC CGA GCT GAA CAG ATA CAG CAG T TG TCT ACT AGG TTA TCT GAA GC 1200
876 GGATGATCTCAAACCCCGAGCTGAACAGATACAGCAGTTGTCTACTAGGTTATCTGAAGC 935
292 --D--D--L--K--P--R--A--E--Q--I--Q--Q--L--S--T--R--L--S--E--A 312
1201 T CGT AAT GCA AGA TCA CTA ACA AAT CTG GTC AAG GAA ATT GAT GGA AAG CTG GGG CCT TT 1260
936 TCGTAATGCAAGATCACTAACAAATCTGGTCAAGGAAATTGATGGAAAGCTGGGGCCTTT 995
312 --R--N--A--R--S--L--T--N--L--V--K--E--I--D--G--K--L--G--P--L 332
1261 A GAA ATC AAA CCA AAG ATT GTT ACT GAC TCG GAA TCC GAT AAA CCT GAA AAT ACA GAA AA 1320
996 AGAAATCAAACCAAAGATTGTTACTGACTCGGAATCCGATAAACCTGAAAATACAGAAAA 1055
332 --E--I--K--P--K--I--V--T--D--S--E--S--D--K--P--E--N--T--E--K 352
1321 G AAA GCC TTA GAA GAA GCT GAG ATT AAA GAA AAA CCA GAG ACG AGT AAC TTA AAA GCT GT 1380
1056 GAAAGCCTTAGAAGAAGCTGAGATTAAAGAAAAACCAGAGACGAGTAACTTAAAAGCTGT 1115
352 --K--A--L--E--E--A--E--I--K--E--K--P--E--T--S--N--L--K--A--V 372
1381 T ACA TTG GAG CAA ACC GCG AGA GAA GCT CCG GAA GAT AAA TTG GTT TCA AAA GAA GTA GA 1440
1116 TACATTGGAGCAAACCGCGAGAGAAGCTCCGGAAGATAAATTGGTTTCAAAAGAAGTAGA 1175
372 --T--L--E--Q--T--A--R--E--A--P--E--D--K--L--V--S--K--E--V--D 392
1441 T GCT GCA ATG GTG AAA GAA GCT GCA AAG AAA GTT TCA GAA GCT GAG ATA GCA GAC AAT GT 1500
1176 TGCTGCAATGGTGAAAGAAGCTGCAAAGAAAGTTTCAGAAGCTGAGATAGCAGACAATGT 1235
392 --A--A--M--V--K--E--A--A--K--K--V--S--E--A--E--I--A--D--N--V 412
1501 T AAT GAA GAA GGC GAA TTA AAA GCG CAG AAG CTT TTA GAA ATA GGC GAG TTC ATC AAA GA 1560
1236 TAATGAAGAAGGCGAATTAAAAGCGCAGAAGCTTTTAGAAATAGGCGAGTTCATCAAAGA 1295
412 --N--E--E--G--E--L--K--A--Q--K--L--L--E--I--G--E--F--I--K--E 432
1561 A GGA GAC AAC AAC TCT GCA GAT GAT TTA TCA GAG AGA ACC GAA ACC AAA GCT CCA GAA GT 1620
1296 AGGAGACAACAACTCTGCAGATGATTTATCAGAGAGAACCGAAACCAAAGCTCCAGAAGT 1355
432 --G--D--N--N--S--A--D--D--L--S--E--R--T--E--T--K--A--P--E--V 452
1621 T GTG GTC ATG GAT GAG GCT AGA GAG GAG GAG GAT AGT GTA GAG ACA AAA GAC ACA AGA AC 1680
1356 TGTGGTCATGGATGAGGCTAGAGAGGAGGAGGATAGTGTAGAGACAAAAGACACAAGAAC 1415
452 --V--V--M--D--E--A--R--E--E--E--D--S--V--E--T--K--D--T--R--T 472
1681 A TAT GAA ACA ATC AGA GGT TTA GAG ATT GAA GCC AAT GAA ATG ATT GAT GAA GAG ACA AA 1740
1416 ATATGAAACAATCAGAGGTTTAGAGATTGAAGCCAATGAAATGATTGATGAAGAGACAAA 1475
472 --Y--E--T--I--R--G--L--E--I--E--A--N--E--M--I--D--E--E--T--K 492
1741 G AAA TCG ACT GAA ACC AAA ACC GAA GCT CCA TCA AGA ATA GTC ATG GAC AAA GAG GGG GA 1800
1476 GAAATCGACTGAAACCAAAACCGAAGCTCCATCAAGAATAGTCATGGACAAAGAGGGGGA 1535
492 --K--S--T--E--T--K--T--E--A--P--S--R--I--V--M--D--K--E--G--D 512
1801 T GAA GAG ACA AAG AAA TCA ACT GAA ACA GAA ACC GAA GCT CCA TCG AGA ATA GTC ATG GA 1860
1536 TGAAGAGACAAAGAAATCAACTGAAACAGAAACCGAAGCTCCATCGAGAATAGTCATGGA 1595
512 --E--E--T--K--K--S--T--E--T--E--T--E--A--P--S--R--I--V--M--E 532
1861 G ACA GAG AAG GAT GAA GAG ACT ATG AAC TCT AGG GCT CGT GCT TCG GAT GAA GCT GAA GC 1920
1596 GACAGAGAAGGATGAAGAGACTATGAACTCTAGGGCTCGTGCTTCGGATGAAGCTGAAGC 1655
532 --T--E--K--D--E--E--T--M--N--S--R--A--R--A--S--D--E--A--E--A 552
1921 A CTG TCA AAG AGC TCT CAA GGT TTT TCT ACG GTG CAA GCT GAA ACC GTA CCC CAT ATG TC 1980
1656 ACTGTCAAAGAGCTCTCAAGGTTTTTCTACGGTGCAAGCTGAAACCGTACCCCATATGTC 1715
552 --L--S--K--S--S--Q--G--F--S--T--V--Q--A--E--T--V--P--H--M--S 572
1981 T TAA CATCTTTTGTTGAGACAGTTCAAACTCTTGAAGCTAGCATGGAGTGTATGTTTTCT 2040
1716 TTAA........................................................ 1719
--*-........................................................ 572
2041 TTTCATTTAACCAAAGATTGTTTCTTTTGTCTGTCTGAAAATATTTGAGTCATCAAATGT 2100
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2101 ATCCAATTTTGTATTGCTTAATCAATTGATTGGTTTTTTGCCGTAATTCATCAATTCATT 2160
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2161 ATGATTGTCC 2170
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