Transcript: AT3G05250.1 AT3G05250-202
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Description
RING/U-box superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:819689 ]
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AT3G05250-202 AT3G05250.1 1036 278aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
Q8GYA2 - A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.html Ensembl Canonical, AT3G05250-201 AT3G05250.2 1115 209aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
A0A1I9LQP6 - - AT3G05250-203 AT3G05250.3 791 209aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
A0A1I9LQP6 - -
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Codons Alternating codons Alternating codons Exons Variants Other Markup ▼ ▲
1 CACAACGACGCCGTAACGCTGAATCAGCGCCAAGCGGAGAGAGACCTGAGTCAGTGAGTT 60
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61 GGT ATG GCG GCG AAG GAG ATC GCC GGC GGG AGC GGT TCT ATT GAC GAT GGA TCC GAT TTT 120
...ATGGCGGCGAAGGAGATCGCCGGCGGGAGCGGTTCTATTGACGATGGATCCGATTTT 57
...-M--A--A--K--E--I--A--G--G--S--G--S--I--D--D--G--S--D--F- 19
121 GAT CCA TGT CCT ATT TGC CTT GGA CAA TTC CTC CGT GAA TCC TAC CTT GAT ACC TGT TTC 180
58 GATCCATGTCCTATTTGCCTTGGACAATTCCTCCGTGAATCCTACCTTGATACCTGTTTC 117
20 -D--P--C--P--I--C--L--G--Q--F--L--R--E--S--Y--L--D--T--C--F- 39
181 C AC AAG TTT TGT TTC AAT TGT ATA AAA CAA TGG ATC AAA GTT GTT TCA AGC AAG GCC TCT 240
118 CACAAGTTTTGTTTCAATTGTATAAAACAATGGATCAAAGTTGTTTCAAGCAAGGCCTCT 177
40 -H--K--F--C--F--N--C--I--K--Q--W--I--K--V--V--S--S--K--A--S- 59
241 AAG CAA CGT TCC TCA GTG ACA TGT CCT CTC TGT AAG A CA GAG AAT TTA TCC ATC ATC CAC 300
178 AAGCAACGTTCCTCAGTGACATGTCCTCTCTGTAAGACAGAGAATTTATCCATCATCCAC 237
60 -K--Q--R--S--S--V--T--C--P--L--C--K--T--E--N--L--S--I--I--H- 79
301 AAC TAC GAT GGA TGT TCT TTT GAG CGG CAT TAT ATC GAC CCG AAT ATT CCA GAT GG T TTT 360
238 AACTACGATGGATGTTCTTTTGAGCGGCATTATATCGACCCGAATATTCCAGATGGTTTT 297
80 -N--Y--D--G--C--S--F--E--R--H--Y--I--D--P--N--I--P--D--G--F- 99
361 GTA TTA ACA AAA GAA CAG AGA TAC AGG TTG CAG TGT TAC TAC ACC GAA TCA G G T TTC CTC 420
298 GTATTAACAAAAGAACAGAGATACAGGTTGCAGTGTTACTACACCGAATCAGGTTTCCTC 357
100 -V--L--T--K--E--Q--R--Y--R--L--Q--C--Y--Y--T--E--S--G--F--L- 119
421 GCC GAT GTA TTC GAT GTT GCA CGG TTT TGG AAG CTG CAA AAG TTT CTC CAG CCG AAC CGG 480
358 GCCGATGTATTCGATGTTGCACGGTTTTGGAAGCTGCAAAAGTTTCTCCAGCCGAACCGG 417
120 -A--D--V--F--D--V--A--R--F--W--K--L--Q--K--F--L--Q--P--N--R- 139
481 TGC CTT GAA GCC TGG TTG AGG AGG GAG CTT CAA GCT CTG ATG CAG G AG GAA GAT GTT GAT 540
418 TGCCTTGAAGCCTGGTTGAGGAGGGAGCTTCAAGCTCTGATGCAGGAGGAAGATGTTGAT 477
140 -C--L--E--A--W--L--R--R--E--L--Q--A--L--M--Q--E--E--D--V--D- 159
541 ATT GTT CTG CAT CAT TTG GTC GGT GTG ATG GAA TCC TTC TGC AAA AG A ATC AAA CAG AGA 600
478 ATTGTTCTGCATCATTTGGTCGGTGTGATGGAATCCTTCTGCAAAAGAATCAAACAGAGA 537
160 -I--V--L--H--H--L--V--G--V--M--E--S--F--C--K--R--I--K--Q--R- 179
601 CGC AAA CAA GAA ACA AGA AGC GCA GAG ACA ACA AAT CAA GAA CAA TTC AAA GCA GTT GTC 660
538 CGCAAACAAGAAACAAGAAGCGCAGAGACAACAAATCAAGAACAATTCAAAGCAGTTGTC 597
180 -R--K--Q--E--T--R--S--A--E--T--T--N--Q--E--Q--F--K--A--V--V- 199
661 TCA GAA GCA GCA CGT CCA TTT GTA ATG GCG AGA ACA GAC CGA TTT GTG GAT GAA CTT GAA 720
598 TCAGAAGCAGCACGTCCATTTGTAATGGCGAGAACAGACCGATTTGTGGATGAACTTGAA 657
200 -S--E--A--A--R--P--F--V--M--A--R--T--D--R--F--V--D--E--L--E- 219
721 CTC TTT CTG GCC GCG GGA CTA AAC TTG GAG GCT TAT GAT GCA ATC TAT AAG CAG GGT TTA 780
658 CTCTTTCTGGCCGCGGGACTAAACTTGGAGGCTTATGATGCAATCTATAAGCAGGGTTTA 717
220 -L--F--L--A--A--G--L--N--L--E--A--Y--D--A--I--Y--K--Q--G--L- 239
781 GAG GGG AAC AAC CGA AGA GAG ATC GGT GCA GCT AGT GAA GAA AGA GAA GAA GTG GAA GAA 840
718 GAGGGGAACAACCGAAGAGAGATCGGTGCAGCTAGTGAAGAAAGAGAAGAAGTGGAAGAA 777
240 -E--G--N--N--R--R--E--I--G--A--A--S--E--E--R--E--E--V--E--E- 259
841 CAT AAT GTA AGA ACA CGA GTG ACT CCT TAT TTG TTT ATC TTC GAG GAA GAC TCA GAC TGA 900
778 CATAATGTAAGAACACGAGTGACTCCTTATTTGTTTATCTTCGAGGAAGACTCAGACTGA 837
260 -H--N--V--R--T--R--V--T--P--Y--L--F--I--F--E--E--D--S--D--*- 278
901 GACAAAACACTTATCACTTCTGTACCATATAAAGAAACTCATAACTTCGATTAATGATAT 960
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961 ACCAGTTTCGATTTGTTTGTTTTACTTTGTGTAATGCTAACGAAACCAACCATACCATTT 1020
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1021 TATTCTGTTCTCTTTT 1036
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