Transcript: AT2G19260.1 AT2G19260-201
.
Description
RING/FYVE/PHD zinc finger superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:816443 ]
Show/hide columns (1 hidden)
AT2G19260-202 AT2G19260.2 2648 631aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
F4ISG1 - A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.html Ensembl Canonical, AT2G19260-201 AT2G19260.1 2514 631aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
F4ISG1 - -
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1 TTTTGAAGTTATATATATAAATTTTTCCACAGGAAAATCAAAGAAAGTTGTTTTGCCAGT 60
............................................................
............................................................
61 GAGTTAGAGAGAGAGAGAGCGATAGAGCGAGAGAGAGAGAGAGCTTGCGTCAGTGGAGGA 120
............................................................
............................................................
121 GTCGGAAACTTGAGAAACTTGTTTAGAAGAAACGCCATAACTTGGAGAAGCCCAAACGAG 180
............................................................
............................................................
181 GATTTTGCTCTTGTGTATCTTCGTAGTCCATCTGGTGATCAGAAGGATATGAGCATTACC 240
............................................................
............................................................
241 ATTCCAGAGGGACTACATGAAGAAGTCGACCAACAGATTCATTGGTACTTAGAGAAGTAA 300
............................................................
............................................................
301 TGTGCTTTCAGATACTTTTTTGGTTTCTCAGGAAAACATGTTGGTGGAAAGTTCGTTCAG 360
.....................................ATGTTGGTGGAAAGTTCGTTCAG 23
.....................................-M--L--V--E--S--S--F--S 8
361 CTCTTCTGTTGAAACTAGTCTACTGAACGTATCCGAGTATCAAGACCCATTTGCTGCATA 420
24 CTCTTCTGTTGAAACTAGTCTACTGAACGTATCCGAGTATCAAGACCCATTTGCTGCATA 83
8 --S--S--V--E--T--S--L--L--N--V--S--E--Y--Q--D--P--F--A--A--Y 28
421 TGATTGGACGTCTCTTGCTGAATCTTATCAGATGATCCACAAAGTTCCCGAACAGTCTCA 480
84 TGATTGGACGTCTCTTGCTGAATCTTATCAGATGATCCACAAAGTTCCCGAACAGTCTCA 143
28 --D--W--T--S--L--A--E--S--Y--Q--M--I--H--K--V--P--E--Q--S--Q 48
481 AGTAAGCTTTCTTAAAAATGTTCCAGTCACTGATACTATGAATCTTGATGAATCAAAACA 540
144 AGTAAGCTTTCTTAAAAATGTTCCAGTCACTGATACTATGAATCTTGATGAATCAAAACA 203
48 --V--S--F--L--K--N--V--P--V--T--D--T--M--N--L--D--E--S--K--H 68
541 TCCAAAACATCAAGAAAGTTGTTCAGAGAAATCTGTTATGCATAAGGTATCGGGAAAGGC 600
204 TCCAAAACATCAAGAAAGTTGTTCAGAGAAATCTGTTATGCATAAGGTATCGGGAAAGGC 263
68 --P--K--H--Q--E--S--C--S--E--K--S--V--M--H--K--V--S--G--K--A 88
601 TCTGACTTCTCTTGTGTATCGTCGAAGGAAGAGGACCTTAATACCTGGGGGAACTGAGGA 660
264 TCTGACTTCTCTTGTGTATCGTCGAAGGAAGAGGACCTTAATACCTGGGGGAACTGAGGA 323
88 --L--T--S--L--V--Y--R--R--R--K--R--T--L--I--P--G--G--T--E--E 108
661 ACATAACCTAGGAAAAATCAGGAAACAGGATGATTCTCTTGATGACTCTATTGTCTCTTT 720
324 ACATAACCTAGGAAAAATCAGGAAACAGGATGATTCTCTTGATGACTCTATTGTCTCTTT 383
108 --H--N--L--G--K--I--R--K--Q--D--D--S--L--D--D--S--I--V--S--L 128
721 ATATAACCCTGAAGAAAGCACAAAAAGGAAAAATCGCTTCAACAACTGTCTTGTCTATAG 780
384 ATATAACCCTGAAGAAAGCACAAAAAGGAAAAATCGCTTCAACAACTGTCTTGTCTATAG 443
128 --Y--N--P--E--E--S--T--K--R--K--N--R--F--N--N--C--L--V--Y--S 148
781 CCGGAAAAAAAGGAGAGGGGAATCCAGTTGTACTTTTACTGGAGAAACTACGATAAGGGG 840
444 CCGGAAAAAAAGGAGAGGGGAATCCAGTTGTACTTTTACTGGAGAAACTACGATAAGGGG 503
148 --R--K--K--R--R--G--E--S--S--C--T--F--T--G--E--T--T--I--R--G 168
841 TGATGGGCTTGATGATGCTTTTGTTTCTGAGCATGACTGTGGAGAAACCAGGAGAAGAGG 900
504 TGATGGGCTTGATGATGCTTTTGTTTCTGAGCATGACTGTGGAGAAACCAGGAGAAGAGG 563
168 --D--G--L--D--D--A--F--V--S--E--H--D--C--G--E--T--R--R--R--G 188
901 CAATCGATCAGATGATTGCCTTGTGTATAGCAGGAAGAAAGGTAGAGTGAAATTTAATAG 960
564 CAATCGATCAGATGATTGCCTTGTGTATAGCAGGAAGAAAGGTAGAGTGAAATTTAATAG 623
188 --N--R--S--D--D--C--L--V--Y--S--R--K--K--G--R--V--K--F--N--S 208
961 TTGTAGTTTTAGCAAACATGTCACTGGACGAACCAAGATAAGCTATGATCAAGCTGACTC 1020
624 TTGTAGTTTTAGCAAACATGTCACTGGACGAACCAAGATAAGCTATGATCAAGCTGACTC 683
208 --C--S--F--S--K--H--V--T--G--R--T--K--I--S--Y--D--Q--A--D--S 228
1021 TTCTGCATGTAGCCAAATGGGACAGATAGTTAAAGCTGATAGTTCTTTAACTAGACCTAA 1080
684 TTCTGCATGTAGCCAAATGGGACAGATAGTTAAAGCTGATAGTTCTTTAACTAGACCTAA 743
228 --S--A--C--S--Q--M--G--Q--I--V--K--A--D--S--S--L--T--R--P--K 248
1081 GCCTGGAGAAATCAAGAAAAGTGGTCATCAACTTGTTTACAGCCAAAGAAAGCAGTTAGT 1140
744 GCCTGGAGAAATCAAGAAAAGTGGTCATCAACTTGTTTACAGCCAAAGAAAGCAGTTAGT 803
248 --P--G--E--I--K--K--S--G--H--Q--L--V--Y--S--Q--R--K--Q--L--V 268
1141 GAAATCTAATGGGAGCTTTACTGAAAGTCATGTTGGAAAAACCAAGAGAAATGGAGATAG 1200
804 GAAATCTAATGGGAGCTTTACTGAAAGTCATGTTGGAAAAACCAAGAGAAATGGAGATAG 863
268 --K--S--N--G--S--F--T--E--S--H--V--G--K--T--K--R--N--G--D--R 288
1201 ATCTGAGGTCTTACTTACGTATAGCCGGAGGAAGAAGAGTGGGAAATCTATTGGTGTTCG 1260
864 ATCTGAGGTCTTACTTACGTATAGCCGGAGGAAGAAGAGTGGGAAATCTATTGGTGTTCG 923
288 --S--E--V--L--L--T--Y--S--R--R--K--K--S--G--K--S--I--G--V--R 308
1261 GGTTAATGGCTTTCTAGTTTATACCCGGAAGAAGTTAAAATTCAGAGGACCTTTTGCTAG 1320
924 GGTTAATGGCTTTCTAGTTTATACCCGGAAGAAGTTAAAATTCAGAGGACCTTTTGCTAG 983
308 --V--N--G--F--L--V--Y--T--R--K--K--L--K--F--R--G--P--F--A--R 328
1321 ACGTGACCTAAGCGAAACCAAGAAAAATGGTGATCAACGTTCTACTGTCAGTTCTCGAGA 1380
984 ACGTGACCTAAGCGAAACCAAGAAAAATGGTGATCAACGTTCTACTGTCAGTTCTCGAGA 1043
328 --R--D--L--S--E--T--K--K--N--G--D--Q--R--S--T--V--S--S--R--E 348
1381 ACTTTTAGACGATACCCAAGTTACCGAAGTGACATGTTCTTCTGATGGAACAAATGACAG 1440
1044 ACTTTTAGACGATACCCAAGTTACCGAAGTGACATGTTCTTCTGATGGAACAAATGACAG 1103
348 --L--L--D--D--T--Q--V--T--E--V--T--C--S--S--D--G--T--N--D--S 368
1441 CTGCTCCTCATTGAAATCCAGTTCTGAAGTTAATTCAACTTCTAGTAAATCTCGGGAAGA 1500
1104 CTGCTCCTCATTGAAATCCAGTTCTGAAGTTAATTCAACTTCTAGTAAATCTCGGGAAGA 1163
368 --C--S--S--L--K--S--S--S--E--V--N--S--T--S--S--K--S--R--E--D 388
1501 TGATTGCTATTCCTCTGATTCTGGGGTGTCTGAGACAGATACAGATGGTAGTAGCAGCCC 1560
1164 TGATTGCTATTCCTCTGATTCTGGGGTGTCTGAGACAGATACAGATGGTAGTAGCAGCCC 1223
388 --D--C--Y--S--S--D--S--G--V--S--E--T--D--T--D--G--S--S--S--P 408
1561 TTTCAGGCAGTGTAAACATTGTGATAAGCCAGGAACTGTCGAAAAGATGCTAATTTGTGA 1620
1224 TTTCAGGCAGTGTAAACATTGTGATAAGCCAGGAACTGTCGAAAAGATGCTAATTTGTGA 1283
408 --F--R--Q--C--K--H--C--D--K--P--G--T--V--E--K--M--L--I--C--D 428
1621 TGAATGTGAAGAAGCATATCATACACGCTGCTGCGGTGTTCAAATGAAAGACGTTGCAGA 1680
1284 TGAATGTGAAGAAGCATATCATACACGCTGCTGCGGTGTTCAAATGAAAGACGTTGCAGA 1343
428 --E--C--E--E--A--Y--H--T--R--C--C--G--V--Q--M--K--D--V--A--E 448
1681 GATAGATGAGTGGCTCTGTCCATCCTGTTTGAAAAATCAGTCATCAAAGACCAAGACTAA 1740
1344 GATAGATGAGTGGCTCTGTCCATCCTGTTTGAAAAATCAGTCATCAAAGACCAAGACTAA 1403
448 --I--D--E--W--L--C--P--S--C--L--K--N--Q--S--S--K--T--K--T--K 468
1741 GGGGAGAATTTCACATGAACGGAAATGGAGAGTTACAGTACCATTTGTAATAGGAATTAG 1800
1404 GGGGAGAATTTCACATGAACGGAAATGGAGAGTTACAGTACCATTTGTAATAGGAATTAG 1463
468 --G--R--I--S--H--E--R--K--W--R--V--T--V--P--F--V--I--G--I--R 488
1801 AATAGGAAAAATGTTTCAAGCAGATGTTCCAGACTGGTCAGGTCCAACAATGAGTGATAC 1860
1464 AATAGGAAAAATGTTTCAAGCAGATGTTCCAGACTGGTCAGGTCCAACAATGAGTGATAC 1523
488 --I--G--K--M--F--Q--A--D--V--P--D--W--S--G--P--T--M--S--D--T 508
1861 TTCTTTTGTGGGTGAACCATTGGAAATTGGCCAGTCAGAATACATGCATGATCTCAAGAA 1920
1524 TTCTTTTGTGGGTGAACCATTGGAAATTGGCCAGTCAGAATACATGCATGATCTCAAGAA 1583
508 --S--F--V--G--E--P--L--E--I--G--Q--S--E--Y--M--H--D--L--K--K 528
1921 GGCCAAGAATAGTAAGAAACAATGTTCTGCAGTGAATTGGCTTCAATGCAGAGAAGAAGA 1980
1584 GGCCAAGAATAGTAAGAAACAATGTTCTGCAGTGAATTGGCTTCAATGCAGAGAAGAAGA 1643
528 --A--K--N--S--K--K--Q--C--S--A--V--N--W--L--Q--C--R--E--E--D 548
1981 TACTAATGGAGTTATCTGCGGAAAGTGGCGTAGGGCCCCTCGTTCAGAGGTACAAACCAA 2040
1644 TACTAATGGAGTTATCTGCGGAAAGTGGCGTAGGGCCCCTCGTTCAGAGGTACAAACCAA 1703
548 --T--N--G--V--I--C--G--K--W--R--R--A--P--R--S--E--V--Q--T--K 568
2041 AGACTGGGAATGCTTCTGCTGCTTCTCTTGGGATCCATCACGTGCTGACTGTGCCGTCCC 2100
1704 AGACTGGGAATGCTTCTGCTGCTTCTCTTGGGATCCATCACGTGCTGACTGTGCCGTCCC 1763
568 --D--W--E--C--F--C--C--F--S--W--D--P--S--R--A--D--C--A--V--P 588
2101 TCAGGAACTGGAGACAAGTGAGATCCTTAAACAACTCAAGTACATCAAGATGCTTAGACC 2160
1764 TCAGGAACTGGAGACAAGTGAGATCCTTAAACAACTCAAGTACATCAAGATGCTTAGACC 1823
588 --Q--E--L--E--T--S--E--I--L--K--Q--L--K--Y--I--K--M--L--R--P 608
2161 TCGATCAGACGCCAAAAAGCGAAAACTAGGACCAAAGGGTCGAAGCAGATCACATATCAA 2220
1824 TCGATCAGACGCCAAAAAGCGAAAACTAGGACCAAAGGGTCGAAGCAGATCACATATCAA 1883
608 --R--S--D--A--K--K--R--K--L--G--P--K--G--R--S--R--S--H--I--K 628
2221 AGGAAAATCTTGATGGACACAATCAAAATGCATATGCTTTTGGATTAGAGAGACCTTAGA 2280
1884 AGGAAAATCTTGA............................................... 1896
628 --G--K--S--*-............................................... 631
2281 AACTAGAAAGGTAACATCAGAAATTTTTTGTGAAGCGCCAATGCTTTTTGTACTACTTGA 2340
............................................................
............................................................
2341 GGATATCAAGTTGCTTTCTAAGTGACTAATTAGGTTCAGATCTTTTGTTAGCTCCCAAAA 2400
............................................................
............................................................
2401 CAGGAGTAGTGAATAGAACGTTTGTGTTAAGGGACAGGTTCTGGGTTAAATGTGAGATTC 2460
............................................................
............................................................
2461 ATCTTGAATGCAACAAAATCTATAATCAGCTTCCGGGTCAAAGCATTCTGCTGA 2514
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