Arabidopsis thaliana (TAIR10)
Description

OTU-like cysteine protease family protein [Source:NCBI gene (formerly Entrezgene);Acc:841489]

Location
About this transcript

This transcript has 9 exons, is annotated with 7 domains and features, is associated with 330 variant alleles and maps to 43 oligo probes.

Gene

This transcript is a product of gene AT1G50670 Show transcript tableHide transcript table

Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
AT1G50670-201AT1G50670.11152208aa
 
Protein coding
A0A384LJN6 Q9LPT6 -Ensembl Canonical
AT1G50670-202AT1G50670.2996208aa
 
Protein coding
A0A384LJN6 Q9LPT6 --
AT1G50670-203AT1G50670.3915208aa
 
Protein coding
A0A384LJN6 Q9LPT6 --
Codons
  • Alternating codons
  • Alternating codons
Exons
  • An exon
  • Another exon
Variants
  • loading
Other
  • UTR
Markup
  • loading
                                                                          
     1 CTCTTGCCCAACGGTGAGTTCTTCTTATCTAACTTTCCTTTTCATTCACATTGGGTTTTG     60
       ............................................................       
       ............................................................       

                                                                          
    61 GTGGATCCAATTTTCATCTTCCCTTTTAGGTTGGAATTTTGAGTTTTATCTTCCCATTTC    120
       ............................................................       
       ............................................................       

                                                                          
   121 TGGATTTTGTTTCTCTCTAGTCTATTCCTTCAAAACCAAGAACCCAACTTTGTTTTATAT    180
       ............................................................       
       ............................................................       

                                                                          
   181 TCAAAAGTTGTTTGCTTTCATCGCGTTTGGTGTTCATCTTCATCTGGTTTGAGATTATAA    240
       ............................................................       
       ............................................................       

                                                                          
   241 TAACATGGAAGGAATCATTGTGAGAAGAGTTATACCATCTGATAACAGTTGTCTCTTCAA    300
       ....ATGGAAGGAATCATTGTGAGAAGAGTTATACCATCTGATAACAGTTGTCTCTTCAA     56
       ....-M--E--G--I--I--V--R--R--V--I--P--S--D--N--S--C--L--F--N     19

                                                                          
   301 TGCAATCGGTTATGTCATGGACAAGGACAAAAACAAAGCTCCTGAGCTCAGACAGGTGAT    360
    57 TGCAATCGGTTATGTCATGGACAAGGACAAAAACAAAGCTCCTGAGCTCAGACAGGTGAT    116
    19 --A--I--G--Y--V--M--D--K--D--K--N--K--A--P--E--L--R--Q--V--I     39

                                                                          
   361 AGCAGCAGCAGTTGCAAGCAACAAGGAGAAATATAATGAAGCATTTCTAGGGAAGCTCAA    420
   117 AGCAGCAGCAGTTGCAAGCAACAAGGAGAAATATAATGAAGCATTTCTAGGGAAGCTCAA    176
    39 --A--A--A--V--A--S--N--K--E--K--Y--N--E--A--F--L--G--K--L--N     59

                                                                          
   421 TGAAGAATATTGTGCTTGGATTCTCAATCCAGACAAGTGGGGAGGTGCGATTGAGCTTTC    480
   177 TGAAGAATATTGTGCTTGGATTCTCAATCCAGACAAGTGGGGAGGTGCGATTGAGCTTTC    236
    59 --E--E--Y--C--A--W--I--L--N--P--D--K--W--G--G--A--I--E--L--S     79

                                                                          
   481 GATATTAGCAGATTATTATGGTCGAGAAATTGCAGCTTACGACATTCAAACTAGTCGATG    540
   237 GATATTAGCAGATTATTATGGTCGAGAAATTGCAGCTTACGACATTCAAACTAGTCGATG    296
    79 --I--L--A--D--Y--Y--G--R--E--I--A--A--Y--D--I--Q--T--S--R--C     99

                                                                          
   541 TGACTTGTATGGACAGACGAGAAACTACGACGAAAGAGTTATGCTGATCTATGACGGTCT    600
   297 TGACTTGTATGGACAGACGAGAAACTACGACGAAAGAGTTATGCTGATCTATGACGGTCT    356
    99 --D--L--Y--G--Q--T--R--N--Y--D--E--R--V--M--L--I--Y--D--G--L    119

                                                                          
   601 TCATTACGATGCTCTTGCTCTGTCTCCATTTGAAGGGGCCGAGGAAGATTTTGATATGAC    660
   357 TCATTACGATGCTCTTGCTCTGTCTCCATTTGAAGGGGCCGAGGAAGATTTTGATATGAC    416
   119 --H--Y--D--A--L--A--L--S--P--F--E--G--A--E--E--D--F--D--M--T    139

                                                                          
   661 TATATATCCAGTTGGTAAAGATAGATCCATAGGATCAATTGAAGGGCTTGCTTTGAATCT    720
   417 TATATATCCAGTTGGTAAAGATAGATCCATAGGATCAATTGAAGGGCTTGCTTTGAATCT    476
   139 --I--Y--P--V--G--K--D--R--S--I--G--S--I--E--G--L--A--L--N--L    159

                                                                          
   721 AGTGAAGGACCAACAAAGGAAAAGGAGTTACACAGATACTGCAAACTTCACTCTACGTTG    780
   477 AGTGAAGGACCAACAAAGGAAAAGGAGTTACACAGATACTGCAAACTTCACTCTACGTTG    536
   159 --V--K--D--Q--Q--R--K--R--S--Y--T--D--T--A--N--F--T--L--R--C    179

                                                                          
   781 CGGTGTTTGCCAAATTGGAGTTATTGGACAAAAGGAAGCTGTGGAACATGCTCAAGCAAC    840
   537 CGGTGTTTGCCAAATTGGAGTTATTGGACAAAAGGAAGCTGTGGAACATGCTCAAGCAAC    596
   179 --G--V--C--Q--I--G--V--I--G--Q--K--E--A--V--E--H--A--Q--A--T    199

                                                                          
   841 TGGTCATGTTAATTTTCAAGAATACAAATAAGAGAATGATTGATTTGATTCTTTTATACA    900
   597 TGGTCATGTTAATTTTCAAGAATACAAATAA.............................    627
   199 --G--H--V--N--F--Q--E--Y--K--*-.............................    208

                                                                          
   901 GTTCCAAGAAACAAGAAAGTAAACCACGAAAATGATGTGCTTAATTTTAATTTTATGTTG    960
       ............................................................       
       ............................................................       

                                                                          
   961 TCAACAATACAAATTCAGTCTGTTGTGCAATTATCTTGTGTTGTGTTCTTTACTCTAGTG   1020
       ............................................................       
       ............................................................       

                                                                          
  1021 ATGACCTCTTTATGAGGAGGATCATTGTTGTCTCACCAATAATGCCATGAAAAAAATGAA   1080
       ............................................................       
       ............................................................       

                                                                          
  1081 CTTCTTTGGATTCATTTGCTCTGTGTTAAAACCAAAAATTTCCAATATGTGGATAGTATT   1140
       ............................................................       
       ............................................................       

                                                                          
  1141 GCTTTTATTTAT                                                   1152
       ............                                                       
       ............