Transcript: AT1G50670.1 AT1G50670-201
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Description
OTU-like cysteine protease family protein [Source:NCBI gene (formerly Entrezgene);Acc:841489 ]
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AT1G50670-201 AT1G50670.1 1152 208aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
A0A384LJN6 Q9LPT6 - A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.html Ensembl Canonical, AT1G50670-202 AT1G50670.2 996 208aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
A0A384LJN6 Q9LPT6 - - AT1G50670-203 AT1G50670.3 915 208aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
A0A384LJN6 Q9LPT6 - -
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Codons Alternating codons Alternating codons Exons Variants Other Markup ▼ ▲
1 CTCTTGCCCAACGGTGAGTTCTTCTTATCTAACTTTCCTTTTCATTCACATTGGGTTTTG 60
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61 GTGGATCCAATTTTCATCTTCCCTTTTAGGTTGGAATTTTGAGTTTTATCTTCCCATTTC 120
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121 TGGATTTTGTTTCTCTCTAGTCTATTCCTTCAAAACCAAGAACCCAACTTTGTTTTATAT 180
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181 TCAAAAGTTGTTTGCTTTCATCGCGTTTGGTGTTCATCTTCATCTGG TTTGAGATTATAA 240
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241 TAAC ATG GAA GGA ATC ATT GTG AGA AGA GTT ATA CCA TCT GAT AAC AGT TGT CTC TTC AA 300
....ATGGAAGGAATCATTGTGAGAAGAGTTATACCATCTGATAACAGTTGTCTCTTCAA 56
....-M--E--G--I--I--V--R--R--V--I--P--S--D--N--S--C--L--F--N 19
301 T GCA ATC GG T TAT GTC ATG GAC AAG GAC AAA AAC AAA GCT CCT GAG CTC AGA CAG G TG AT 360
57 TGCAATCGGTTATGTCATGGACAAGGACAAAAACAAAGCTCCTGAGCTCAGACAGGTGAT 116
19 --A--I--G--Y--V--M--D--K--D--K--N--K--A--P--E--L--R--Q--V--I 39
361 A GCA GCA GCA GTT GCA AGC AAC AAG GAG AAA TAT AAT GAA GCA TTT CTA GGG AAG CTC AA 420
117 AGCAGCAGCAGTTGCAAGCAACAAGGAGAAATATAATGAAGCATTTCTAGGGAAGCTCAA 176
39 --A--A--A--V--A--S--N--K--E--K--Y--N--E--A--F--L--G--K--L--N 59
421 T GAA GAA TAT TGT GCT TGG ATT CTC AAT CCA GAC AAG TGG GGA G G T GCG ATT GAG CTT TC 480
177 TGAAGAATATTGTGCTTGGATTCTCAATCCAGACAAGTGGGGAGGTGCGATTGAGCTTTC 236
59 --E--E--Y--C--A--W--I--L--N--P--D--K--W--G--G--A--I--E--L--S 79
481 G ATA TTA GCA GAT TAT TAT GGT CGA GAA ATT GCA GCT TAC GAC ATT CAA ACT AGT CGA TG 540
237 GATATTAGCAGATTATTATGGTCGAGAAATTGCAGCTTACGACATTCAAACTAGTCGATG 296
79 --I--L--A--D--Y--Y--G--R--E--I--A--A--Y--D--I--Q--T--S--R--C 99
541 T GAC TTG TAT GGA CAG A CG AGA AAC TAC GAC GAA AGA GTT ATG CTG ATC TAT GAC GGT CT 600
297 TGACTTGTATGGACAGACGAGAAACTACGACGAAAGAGTTATGCTGATCTATGACGGTCT 356
99 --D--L--Y--G--Q--T--R--N--Y--D--E--R--V--M--L--I--Y--D--G--L 119
601 T CAT TAC GAT GCT CTT GCT CTG TCT CCA TTT GAA GGG GCC GAG GAA GAT TTT GAT ATG AC 660
357 TCATTACGATGCTCTTGCTCTGTCTCCATTTGAAGGGGCCGAGGAAGATTTTGATATGAC 416
119 --H--Y--D--A--L--A--L--S--P--F--E--G--A--E--E--D--F--D--M--T 139
661 T ATA TAT CCA GTT GGT AAA GAT AGA TCC ATA GGA TCA ATT GAA GGG CTT GCT TTG AAT CT 720
417 TATATATCCAGTTGGTAAAGATAGATCCATAGGATCAATTGAAGGGCTTGCTTTGAATCT 476
139 --I--Y--P--V--G--K--D--R--S--I--G--S--I--E--G--L--A--L--N--L 159
721 A GTG AAG GAC CAA CAA AG G AAA AGG AGT TAC ACA GAT ACT GCA AAC TTC ACT CTA CGT TG 780
477 AGTGAAGGACCAACAAAGGAAAAGGAGTTACACAGATACTGCAAACTTCACTCTACGTTG 536
159 --V--K--D--Q--Q--R--K--R--S--Y--T--D--T--A--N--F--T--L--R--C 179
781 C GGT GTT TGC CAA ATT GGA GTT ATT GGA CAA AAG GAA GCT GTG GAA CAT GCT CAA GCA AC 840
537 CGGTGTTTGCCAAATTGGAGTTATTGGACAAAAGGAAGCTGTGGAACATGCTCAAGCAAC 596
179 --G--V--C--Q--I--G--V--I--G--Q--K--E--A--V--E--H--A--Q--A--T 199
841 T GGT CAT GTT AAT TTT CAA GAA TAC AAA TAA GAGAATGATTGATTTGATTCTTTTATACA 900
597 TGGTCATGTTAATTTTCAAGAATACAAATAA............................. 627
199 --G--H--V--N--F--Q--E--Y--K--*-............................. 208
901 GTTCCAAGAAACAAGAAAGTAAACCACGAAAATGATGTGCTTAATTTTAATTTTATGTTG 960
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961 TCAACAATACAAATTCAGTCTGTTGTGCAATTATCTTGTGTTGTGTTCTTTACTCTAGTG 1020
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1021 ATGACCTCTTTATGAGGAGGATCATTGTTGTCTCACCAATAATGCCATGAAAAAAATGAA 1080
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1081 CTTCTTTGGATTCATTTGCTCTGTGTTAAAACCAAAAATTTCCAATATGTGGATAGTATT 1140
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1141 GCTTTTATTTAT 1152
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