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Arabidopsis thaliana (TAIR10)
Description

RING 1B [Source:NCBI gene (formerly Entrezgene);Acc:839413]

Location
About this transcript

This transcript has 10 exons, is annotated with 23 domains and features, is associated with 187 variant alleles and maps to 45 oligo probes.

Gene

This transcript is a product of gene AT1G03770 Show transcript tableHide transcript table

Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
RING1B-201AT1G03770.21659468aa
 
Protein coding
F4I2H4 -Ensembl Canonical
RING1B-202AT1G03770.42054371aa
 
Protein coding
A0A1P8AWT6 --
RING1B-205AT1G03770.51976344aa
 
Protein coding
A0A1P8AWX4 --
RING1B-204AT1G03770.11815460aa
 
Protein coding
A0A178WM72 Q0WX00 --
RING1B-203AT1G03770.31751462aa
 
Protein coding
A0A178WM67 F4I2H5 --
RING1B-206AT1G03770.61473371aa
 
Protein coding
A0A1P8AWT6 --
Codons
  • Alternating codons
  • Alternating codons
Exons
  • An exon
  • Another exon
Variants
  • loading
Other
  • UTR
Markup
  • loading
                                                                          
     1 TTTCTCTCTTTCTTCTTCGTCCTCCTTTGTTCTCCTTTCTCTCTTTCCATCGGCACCGAA     60
       ............................................................       
       ............................................................       

                                                                          
    61 CCGAAACAACAAAGAACGAGGAAATACAAATAAGCCCACAAGAGAGAGACGTAGATGGAG    120
       ............................................................       
       ............................................................       

                                                                          
   121 AGATAAAGGTCAAAGCTTTATTCTTTTTCCTCTCTCTTCCTAGAAGCAGAGATCACTGTT    180
       ............................................................       
       ............................................................       

                                                                          
   181 ATCAAACAATCAACAATGCCTTCCTTGAAGAGCTTCTCCGCCGCCGAGGAAGAAGATGAC    240
       ...............ATGCCTTCCTTGAAGAGCTTCTCCGCCGCCGAGGAAGAAGATGAC     45
       ...............-M--P--S--L--K--S--F--S--A--A--E--E--E--D--D-     15

                                                                          
   241 CAACTGGGTCGGAACTCAGAAGCTGAAAGATTCAATCCTGAAGCTGTGGAGAAAGAAGAA    300
    46 CAACTGGGTCGGAACTCAGAAGCTGAAAGATTCAATCCTGAAGCTGTGGAGAAAGAAGAA    105
    16 -Q--L--G--R--N--S--E--A--E--R--F--N--P--E--A--V--E--K--E--E-     35

                                                                          
   301 GATCCAGACAAAATGGATGAGAAGGACGAAAGTGGAGATGAGGAAGACGACGTGAAACGT    360
   106 GATCCAGACAAAATGGATGAGAAGGACGAAAGTGGAGATGAGGAAGACGACGTGAAACGT    165
    36 -D--P--D--K--M--D--E--K--D--E--S--G--D--E--E--D--D--V--K--R-     55

                                                                          
   361 GACCAAGTAGAAGCAGAGGATGAGGAAGCGTTAGGAGAAGAAGAAGTTTCAGATTCTAAG    420
   166 GACCAAGTAGAAGCAGAGGATGAGGAAGCGTTAGGAGAAGAAGAAGTTTCAGATTCTAAG    225
    56 -D--Q--V--E--A--E--D--E--E--A--L--G--E--E--E--V--S--D--S--K-     75

                                                                          
   421 GAAAGAAGTCAATCTTCTTCAGCAGGAGAGTTATCAGAATCAGAATATATGGTTGTTGAT    480
   226 GAAAGAAGTCAATCTTCTTCAGCAGGAGAGTTATCAGAATCAGAATATATGGTTGTTGAT    285
    76 -E--R--S--Q--S--S--S--A--G--E--L--S--E--S--E--Y--M--V--V--D-     95

                                                                          
   481 CTAGCGGATATCTGTAAGGACGTGCAATGCTCGATATGTTTAGGGATTATAAGGAAAACA    540
   286 CTAGCGGATATCTGTAAGGACGTGCAATGCTCGATATGTTTAGGGATTATAAGGAAAACA    345
    96 -L--A--D--I--C--K--D--V--Q--C--S--I--C--L--G--I--I--R--K--T-    115

                                                                          
   541 AGGACTGTGATGGAATGTCTCCACCGGTTTTGCCGAGAGTGCATTGATAAGTCAATGAGA    600
   346 AGGACTGTGATGGAATGTCTCCACCGGTTTTGCCGAGAGTGCATTGATAAGTCAATGAGA    405
   116 -R--T--V--M--E--C--L--H--R--F--C--R--E--C--I--D--K--S--M--R-    135

                                                                          
   601 TTGGGGAACAATGAGTGTCCTACTTGCAGAAAACATTGTGCAAGCCGACGTTCTTTAAGA    660
   406 TTGGGGAACAATGAGTGTCCTACTTGCAGAAAACATTGTGCAAGCCGACGTTCTTTAAGA    465
   136 -L--G--N--N--E--C--P--T--C--R--K--H--C--A--S--R--R--S--L--R-    155

                                                                          
   661 GACGACCCAAACTTTGATGCCTTAATAGCAGCTTTATTCAAAAATATTGATAAATTTGAG    720
   466 GACGACCCAAACTTTGATGCCTTAATAGCAGCTTTATTCAAAAATATTGATAAATTTGAG    525
   156 -D--D--P--N--F--D--A--L--I--A--A--L--F--K--N--I--D--K--F--E-    175

                                                                          
   721 GAGGAGGAATTGAATTTTCGTCAAGATGATGAAGCTCGTAATAAGCAGATTCAAGCATCT    780
   526 GAGGAGGAATTGAATTTTCGTCAAGATGATGAAGCTCGTAATAAGCAGATTCAAGCATCT    585
   176 -E--E--E--L--N--F--R--Q--D--D--E--A--R--N--K--Q--I--Q--A--S-    195

                                                                          
   781 ATAGCTCAAGTATCGCAACGACAATCTAAGGCCCTTGTAAAAAGAAAGTCTGTTGGTAAA    840
   586 ATAGCTCAAGTATCGCAACGACAATCTAAGGCCCTTGTAAAAAGAAAGTCTGTTGGTAAA    645
   196 -I--A--Q--V--S--Q--R--Q--S--K--A--L--V--K--R--K--S--V--G--K-    215

                                                                          
   841 GGCACAGCGATCTTATCGAGATCACGACGTAGTGGTGGCGGCTCCAGAAGAAGAAGGAAC    900
   646 GGCACAGCGATCTTATCGAGATCACGACGTAGTGGTGGCGGCTCCAGAAGAAGAAGGAAC    705
   216 -G--T--A--I--L--S--R--S--R--R--S--G--G--G--S--R--R--R--R--N-    235

                                                                          
   901 TGCAGAAACATTGAACAGGATACATCAGAAGCCAATGATGATGATGATCAAAACAAAAGA    960
   706 TGCAGAAACATTGAACAGGATACATCAGAAGCCAATGATGATGATGATCAAAACAAAAGA    765
   236 -C--R--N--I--E--Q--D--T--S--E--A--N--D--D--D--D--Q--N--K--R-    255

                                                                          
   961 GGCAAAGATTCTTCTTCAGATGAGCCTTGTGAGAGGCAACGAAAAAAGCGTTCAGCAACT   1020
   766 GGCAAAGATTCTTCTTCAGATGAGCCTTGTGAGAGGCAACGAAAAAAGCGTTCAGCAACT    825
   256 -G--K--D--S--S--S--D--E--P--C--E--R--Q--R--K--K--R--S--A--T-    275

                                                                          
  1021 CAGCCTTCTTCTTCAAATGCAAACAACAACGATAACTGCGCAGGTAATGGCACAGAGCAG   1080
   826 CAGCCTTCTTCTTCAAATGCAAACAACAACGATAACTGCGCAGGTAATGGCACAGAGCAG    885
   276 -Q--P--S--S--S--N--A--N--N--N--D--N--C--A--G--N--G--T--E--Q-    295

                                                                          
  1081 ACGCATCAGAGGGACAGCAGAGTAATATCACCTGTGCTTGTGTGGAACTCGGAACTAATT   1140
   886 ACGCATCAGAGGGACAGCAGAGTAATATCACCTGTGCTTGTGTGGAACTCGGAACTAATT    945
   296 -T--H--Q--R--D--S--R--V--I--S--P--V--L--V--W--N--S--E--L--I-    315

                                                                          
  1141 GCATGGGGAAGAGGCGGTACAAGGAGTAACACAAGGCAAGGAAATAATAACCAAGGAGCT   1200
   946 GCATGGGGAAGAGGCGGTACAAGGAGTAACACAAGGCAAGGAAATAATAACCAAGGAGCT   1005
   316 -A--W--G--R--G--G--T--R--S--N--T--R--Q--G--N--N--N--Q--G--A-    335

                                                                          
  1201 ATTAGTAAGAGAAATGCTCGCTTGAAAAGACTTGTGGAATATCTCGGGAGCTTAGAGGGT   1260
  1006 ATTAGTAAGAGAAATGCTCGCTTGAAAAGACTTGTGGAATATCTCGGGAGCTTAGAGGGT   1065
   336 -I--S--K--R--N--A--R--L--K--R--L--V--E--Y--L--G--S--L--E--G-    355

                                                                          
  1261 AATAGTGTCGAGTTGGATATTCATCTTAAGCTTGTCTCGCTGGATACAGAAGGTTTACTA   1320
  1066 AATAGTGTCGAGTTGGATATTCATCTTAAGCTTGTCTCGCTGGATACAGAAGGTTTACTA   1125
   356 -N--S--V--E--L--D--I--H--L--K--L--V--S--L--D--T--E--G--L--L-    375

                                                                          
  1321 AACTTACATGAGCCATATCTTTGTTTCCGGCCCACTTTGCTAGTTAAACAACTCCGCGAA   1380
  1126 AACTTACATGAGCCATATCTTTGTTTCCGGCCCACTTTGCTAGTTAAACAACTCCGCGAA   1185
   376 -N--L--H--E--P--Y--L--C--F--R--P--T--L--L--V--K--Q--L--R--E-    395

                                                                          
  1381 TATGTGGCACGCCATTTAAAATTGAAGGCTGAAGAGGTTGAATTGTTGGTGTCTAAAGAT   1440
  1186 TATGTGGCACGCCATTTAAAATTGAAGGCTGAAGAGGTTGAATTGTTGGTGTCTAAAGAT   1245
   396 -Y--V--A--R--H--L--K--L--K--A--E--E--V--E--L--L--V--S--K--D-    415

                                                                          
  1441 GGGGATACGGTCATTGGGAATAAGACCTCAACAGAGAAGATGCAAAGCCTGCAAGATGAT   1500
  1246 GGGGATACGGTCATTGGGAATAAGACCTCAACAGAGAAGATGCAAAGCCTGCAAGATGAT   1305
   416 -G--D--T--V--I--G--N--K--T--S--T--E--K--M--Q--S--L--Q--D--D-    435

                                                                          
  1501 GAGACCGTGGCAAAGCTAAAAGTTGATTGCATTTCGAGCAATGGATATATGATTGTAGTG   1560
  1306 GAGACCGTGGCAAAGCTAAAAGTTGATTGCATTTCGAGCAATGGATATATGATTGTAGTG   1365
   436 -E--T--V--A--K--L--K--V--D--C--I--S--S--N--G--Y--M--I--V--V-    455

                                                                          
  1561 TACCGGAGAAAGCAAATCGCGTAGAAGAGGTTGAAGCAAGTAATTCAAACAGTGTGAATG   1620
  1366 TACCGGAGAAAGCAAATCGCGTAG....................................   1389
   456 -Y--R--R--K--Q--I--A--*-....................................    462

                                                                          
  1621 AATTAGACTGATATGCTCGAGCTTGCTTTCTTAGTCGTGGTTTTAAGACACAAACATAAA   1680
       ............................................................       
       ............................................................       

                                                                          
  1681 ACATGTTTTATTGAAAAGTATTTTTTTTCAGTTTAATAAACTTGAATCAGGATACATAAG   1740
       ............................................................       
       ............................................................       

                                                                          
  1741 ACAATGTACTA                                                    1751
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