Transcript: AT1G03770.3 RING1B-203
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Description
RING 1B [Source:NCBI gene (formerly Entrezgene);Acc:839413 ]
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RING1B-201 AT1G03770.2 1659 468aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
F4I2H4 - A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.html Ensembl Canonical, RING1B-202 AT1G03770.4 2054 371aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
A0A1P8AWT6 - - RING1B-205 AT1G03770.5 1976 344aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
A0A1P8AWX4 - - RING1B-204 AT1G03770.1 1815 460aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
A0A178WM72 Q0WX00 - - RING1B-203 AT1G03770.3 1751 462aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
A0A178WM67 F4I2H5 - - RING1B-206 AT1G03770.6 1473 371aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
A0A1P8AWT6 - -
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Codons Alternating codons Alternating codons Exons Variants Other Markup ▼ ▲
1 TTTCTCTCTTTCTTCTTCGTCCTCCTTTGTTCTCCTTTCTCTCTTTCCATCGGCACCGAA 60
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61 CCGAAACAACAAAGAACGAGGAAATACAAATAAGCCCACAAGAGAGAGACGTAGATGGAG 120
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121 AGATAAAGGTCAAAGCTTTATTCTTTTTCCTCTCTCTTCCTAGAAGCAGAGATCACTGTT 180
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181 ATCAAACAATCAACA ATG CCT TCC TTG AAG AGC TTC TCC GCC GCC GAG GAA GAA GAT GAC 240
...............ATGCCTTCCTTGAAGAGCTTCTCCGCCGCCGAGGAAGAAGATGAC 45
...............-M--P--S--L--K--S--F--S--A--A--E--E--E--D--D- 15
241 CAA CTG GGT CGG AAC TCA GAA GCT GAA AGA TTC AAT CCT GAA GCT GTG GAG AAA GAA GAA 300
46 CAACTGGGTCGGAACTCAGAAGCTGAAAGATTCAATCCTGAAGCTGTGGAGAAAGAAGAA 105
16 -Q--L--G--R--N--S--E--A--E--R--F--N--P--E--A--V--E--K--E--E- 35
301 GAT CCA GAC AAA ATG GAT GAG AAG GAC GAA AGT GGA GAT GAG GAA GAC GAC GTG AAA CGT 360
106 GATCCAGACAAAATGGATGAGAAGGACGAAAGTGGAGATGAGGAAGACGACGTGAAACGT 165
36 -D--P--D--K--M--D--E--K--D--E--S--G--D--E--E--D--D--V--K--R- 55
361 GAC CAA GTA GAA GCA GAG GAT GAG GAA GCG TTA GGA GAA GAA GAA G T T TCA GAT TCT AAG 420
166 GACCAAGTAGAAGCAGAGGATGAGGAAGCGTTAGGAGAAGAAGAAGTTTCAGATTCTAAG 225
56 -D--Q--V--E--A--E--D--E--E--A--L--G--E--E--E--V--S--D--S--K- 75
421 GAA AGA AGT CAA TCT TCT TCA GCA GGA GAG TTA TCA GAA TCA GA A TAT ATG GTT GTT GAT 480
226 GAAAGAAGTCAATCTTCTTCAGCAGGAGAGTTATCAGAATCAGAATATATGGTTGTTGAT 285
76 -E--R--S--Q--S--S--S--A--G--E--L--S--E--S--E--Y--M--V--V--D- 95
481 CTA GCG GAT ATC TGT AAG GAC GTG CAA TGC TCG ATA TGT TTA G GG ATT ATA AGG AAA ACA 540
286 CTAGCGGATATCTGTAAGGACGTGCAATGCTCGATATGTTTAGGGATTATAAGGAAAACA 345
96 -L--A--D--I--C--K--D--V--Q--C--S--I--C--L--G--I--I--R--K--T- 115
541 AGG ACT GTG ATG GAA TGT CTC CAC CGG TTT TGC CGA GAG TGC ATT GAT AAG TCA ATG AGA 600
346 AGGACTGTGATGGAATGTCTCCACCGGTTTTGCCGAGAGTGCATTGATAAGTCAATGAGA 405
116 -R--T--V--M--E--C--L--H--R--F--C--R--E--C--I--D--K--S--M--R- 135
601 TTG GG G AAC AAT GAG TGT CCT ACT TGC AGA AAA CAT TGT GCA AGC CGA CGT TCT TTA AGA 660
406 TTGGGGAACAATGAGTGTCCTACTTGCAGAAAACATTGTGCAAGCCGACGTTCTTTAAGA 465
136 -L--G--N--N--E--C--P--T--C--R--K--H--C--A--S--R--R--S--L--R- 155
661 GAC GAC CCA AAC TTT GAT GCC TTA ATA GCA GCT TTA TTC AAA AAT ATT GAT AAA TTT GAG 720
466 GACGACCCAAACTTTGATGCCTTAATAGCAGCTTTATTCAAAAATATTGATAAATTTGAG 525
156 -D--D--P--N--F--D--A--L--I--A--A--L--F--K--N--I--D--K--F--E- 175
721 GAG GAG GAA TTG AAT TTT CGT CAA GAT GAT GAA GCT CGT AAT AAG CAG A TT CAA GCA TCT 780
526 GAGGAGGAATTGAATTTTCGTCAAGATGATGAAGCTCGTAATAAGCAGATTCAAGCATCT 585
176 -E--E--E--L--N--F--R--Q--D--D--E--A--R--N--K--Q--I--Q--A--S- 195
781 ATA GCT CAA GTA TCG CAA CGA CAA TCT AAG GCC CTT GTA AAA AGA AAG TCT GTT GGT AAA 840
586 ATAGCTCAAGTATCGCAACGACAATCTAAGGCCCTTGTAAAAAGAAAGTCTGTTGGTAAA 645
196 -I--A--Q--V--S--Q--R--Q--S--K--A--L--V--K--R--K--S--V--G--K- 215
841 GGC ACA GCG ATC TTA TCG AGA TCA CGA CGT AGT GGT GGC GGC TCC AGA AGA AGA AGG AAC 900
646 GGCACAGCGATCTTATCGAGATCACGACGTAGTGGTGGCGGCTCCAGAAGAAGAAGGAAC 705
216 -G--T--A--I--L--S--R--S--R--R--S--G--G--G--S--R--R--R--R--N- 235
901 TGC AGA AAC ATT GAA CAG GAT ACA TCA GAA GCC AAT GAT GAT GAT GAT CAA AAC AAA AGA 960
706 TGCAGAAACATTGAACAGGATACATCAGAAGCCAATGATGATGATGATCAAAACAAAAGA 765
236 -C--R--N--I--E--Q--D--T--S--E--A--N--D--D--D--D--Q--N--K--R- 255
961 GGC AAA GAT TCT TCT TCA GAT GAG CCT TGT GAG AGG CAA CGA AAA AAG CGT TCA GCA ACT 1020
766 GGCAAAGATTCTTCTTCAGATGAGCCTTGTGAGAGGCAACGAAAAAAGCGTTCAGCAACT 825
256 -G--K--D--S--S--S--D--E--P--C--E--R--Q--R--K--K--R--S--A--T- 275
1021 CAG CCT TCT TCT TCA AAT GCA AAC AAC AAC GAT AAC TGC GCA GGT AAT GGC ACA GAG CAG 1080
826 CAGCCTTCTTCTTCAAATGCAAACAACAACGATAACTGCGCAGGTAATGGCACAGAGCAG 885
276 -Q--P--S--S--S--N--A--N--N--N--D--N--C--A--G--N--G--T--E--Q- 295
1081 ACG CAT CAG AGG GAC AGC AGA GTA ATA TCA CCT GTG CTT GTG TGG AAC TCG GAA CTA ATT 1140
886 ACGCATCAGAGGGACAGCAGAGTAATATCACCTGTGCTTGTGTGGAACTCGGAACTAATT 945
296 -T--H--Q--R--D--S--R--V--I--S--P--V--L--V--W--N--S--E--L--I- 315
1141 GCA TGG GGA AGA GGC GGT ACA AGG AGT AAC ACA AGG CAA GGA AAT AAT AAC CAA GGA GCT 1200
946 GCATGGGGAAGAGGCGGTACAAGGAGTAACACAAGGCAAGGAAATAATAACCAAGGAGCT 1005
316 -A--W--G--R--G--G--T--R--S--N--T--R--Q--G--N--N--N--Q--G--A- 335
1201 ATT AGT AAG AGA AAT GCT CGC TTG AAA AGA CTT GTG GAA TAT CTC GGG AGC TTA GAG GGT 1260
1006 ATTAGTAAGAGAAATGCTCGCTTGAAAAGACTTGTGGAATATCTCGGGAGCTTAGAGGGT 1065
336 -I--S--K--R--N--A--R--L--K--R--L--V--E--Y--L--G--S--L--E--G- 355
1261 AAT AGT GTC GAG T TG GAT ATT CAT CTT AAG CTT GTC TCG CTG GAT ACA GAA GGT TTA CTA 1320
1066 AATAGTGTCGAGTTGGATATTCATCTTAAGCTTGTCTCGCTGGATACAGAAGGTTTACTA 1125
356 -N--S--V--E--L--D--I--H--L--K--L--V--S--L--D--T--E--G--L--L- 375
1321 AAC TTA CAT GAG CCA TAT CTT TGT TTC CGG CCC ACT TTG CTA GTT AAA CAA CTC CGC GAA 1380
1126 AACTTACATGAGCCATATCTTTGTTTCCGGCCCACTTTGCTAGTTAAACAACTCCGCGAA 1185
376 -N--L--H--E--P--Y--L--C--F--R--P--T--L--L--V--K--Q--L--R--E- 395
1381 TAT GTG GCA CGC CAT TTA AAA TTG AAG GCT GAA GAG GTT GAA TTG TTG GTG TCT AAA GAT 1440
1186 TATGTGGCACGCCATTTAAAATTGAAGGCTGAAGAGGTTGAATTGTTGGTGTCTAAAGAT 1245
396 -Y--V--A--R--H--L--K--L--K--A--E--E--V--E--L--L--V--S--K--D- 415
1441 GGG GAT ACG GTC ATT GGG AAT AAG ACC TCA ACA GAG AAG ATG CAA AGC CTG CAA GAT GAT 1500
1246 GGGGATACGGTCATTGGGAATAAGACCTCAACAGAGAAGATGCAAAGCCTGCAAGATGAT 1305
416 -G--D--T--V--I--G--N--K--T--S--T--E--K--M--Q--S--L--Q--D--D- 435
1501 GAG ACC GTG GCA AAG CTA AAA GTT GAT TGC ATT TCG AGC AAT GGA TAT ATG A TT GTA GTG 1560
1306 GAGACCGTGGCAAAGCTAAAAGTTGATTGCATTTCGAGCAATGGATATATGATTGTAGTG 1365
436 -E--T--V--A--K--L--K--V--D--C--I--S--S--N--G--Y--M--I--V--V- 455
1561 TAC CGG AGA AAG CAA ATC GCG TAG AAGAGGTTGAAGCAAGTAATTCAAACAGTGTGAATG 1620
1366 TACCGGAGAAAGCAAATCGCGTAG.................................... 1389
456 -Y--R--R--K--Q--I--A--*-.................................... 462
1621 AATTAGACTGATATGCTCGAGCTTGCTTTCTTAGTCGTGGTTTTAAGACACAAACATAAA 1680
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1681 ACATGTTTTATTGAAAAGTATTTTTTTTCAGTTTAATAAACTTGAATCAGGATACATAAG 1740
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1741 ACAATGTACTA 1751
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