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    Transcript: AT3G08690.2 UBC11-202

    Description

    ubiquitin-conjugating enzyme 11 [Source:NCBI gene (formerly Entrezgene);Acc:820016]

    Location

    Chromosome 3: 2,641,056-2,642,688 forward strand.

    About this transcript

    This transcript has 5 exons, is annotated with 11 domains and features, is associated with 125 variant alleles and maps to 33 oligo probes.

    Gene

    This transcript is a product of gene AT3G08690 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • RefSeq
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
    UBC11-201AT3G08690.11110148aa
     
    Protein coding
    		A0A654FFU9 P35134 -Ensembl Canonical
    UBC11-202AT3G08690.2975148aa
     
    Protein coding
    		A0A654FFU9 P35134 --

    Protein summary

    Protein domains for AT3G08690.2.

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    Coiled-coils (Ncoils)

    Coiled-coil regions predicted by Ncoils.

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    TIGRFAM

    Protein domains and motifs from the TIGRFAM database.

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    MobiDB lite

    Intrinsically disordered regions predicted by MobiDB lite.

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    SignalP_GRAM_NEGATIVE

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    PIRSF

    Protein domains and motifs from the PIR (Protein Information Resource) Superfamily database.

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    SignalP_GRAM_POSITIVE

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    Transmembrane helices

    Transmembrane helices predicted by TMHMM.

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    Low complexity (Seg)

    Low complexity peptide sequences identified by Seg.

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    Phobius

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    NCBIFAM

    NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).

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    Prints

    Protein fingerprints (groups of conserved motifs) from the PRINTS database.

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    Cleavage site (Signalp)

    Signal peptide cleavage sites predicted by SignalP.

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    SFLD

    Structure-Function Linkage Database families.

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    HAMAP

    HAMAP families.

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    AFDB-ENSP mappings

    Protein features that represent the mapping between Ensembl proteins (ENSP) and AlphaFoldDB protein structures (including their corresponding chains). Imported via UniProt mappings

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    Superfamily

    Protein domains and motifs from the SUPERFAMILY database.

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    SMART

    Protein domains and motifs from the SMART database.

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    Pfam

    Protein domains and motifs from the Pfam database.

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    PROSITE profiles

    Protein domains and motifs from the PROSITE profiles database.

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    PROSITE patterns

    Protein domains and motifs from the PROSITE patterns database.

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    PANTHER

    PANTHER families.

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    Gene3D

    CATH/Gene3D families.

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    CDD

    Conserved Domain Database models.

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    Sequence variants (all sources)

    Sequence variants from all sources

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    Statistics

    Ave. residue weight: 111.832 g/mol

    Charge: 3.0

    Isoelectric point: 7.7925

    Molecular weight: 16,551.08 g/mol

    Number of residues: 148 aa

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