Transcript: AT1G72175.1 AT1G72175-202

Description

E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) [Source:NCBI gene (formerly Entrezgene);Acc:843549]

Location

Chromosome 1: 27,157,875-27,159,735 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 141 variant alleles and maps to 31 oligo probes.

Gene

This transcript is a product of gene AT1G72175 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT1G72175-202	AT1G72175.1	1037	185aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W9L9 Q93WJ5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G72175-201	AT1G72175.2	1419	151aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AWL5	-	-

Oligo probes

This transcript corresponds to the following database identifiers:

AFFY ATH1-121501:

259800_at [10 out of 11 probes from this probeset have been mapped to this transcript. The probeset matches 1 other transcripts.] [view all locations]

AFFY AraGene:

13358224 [13 out of 13 probes from this probeset have been mapped to this transcript. The probeset matches 1 other transcripts.] [view all locations]

AGILENT G2519F-015059: