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Arabidopsis thaliana (TAIR10)
Description

SBP (S-ribonuclease binding protein) family protein [Source:NCBI gene (formerly Entrezgene);Acc:834543]

Location
About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 251 variant alleles and maps to 28 oligo probes.

Gene

This transcript is a product of gene AT5G45100 Show transcript tableHide transcript table

Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
BRG1-202AT5G45100.11357294aa
 
Protein coding
Q9FHE4 -Ensembl Canonical
BRG1-201AT5G45100.21375267aa
 
Protein coding
---
Exons/ Introns
  • Translated sequence
  • Flanking sequence
  • Intron sequence
  • UTR
Markup
  • loading
Show/hide columns
  • No.
  • Exon / Intron
  • Start
  • End
  • Start Phase
  • End Phase
  • Length
  • Sequence
No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
5' upstream sequence
..........aggaaattaatttaaaaaaatgtaaaactttcaaaaggataatttattct
1AT5G45100.1.exon118,218,60318,218,824-2222
CTTTCTAGAAATAATCTTATTTTAATTTATTCATTTTTGACTTTTTTTCTCTCTCTCTCT
TCCTTAAATAAAAAGCCTCCCTCCATAGATTTCTTCACCAGTCTTCTTCTTCTTCTGCCT
CCAAACTCTCTCTTTCTCTCTCGAGAACCTTAAGAAAACGTTACAAATGGCTGTTGAAGC
AAGACACATGAATCTCTTCTCTTCTCAATACATTACCAACAG                  
 Intron 1-218,218,82518,218,91288
gtaaatttcattctcttcacgattc..........ttttgttacatttcttttcttccag
2AT5G45100.1.exon218,218,91318,220,0472-1,135
AGAATGTGTTAAATCTCAAACGAATATGAACAACGGACAACAAATCGCCGGCGGTGGTTT
TCCGGTAACAATCGGTGATCGGAATTTACAGTACATAGATCCGATTAACAGCTTCAACAA
ATCAGAAAGCGAGCTCACAGCTATTTCAAAACGTCAGAGAGATTCAACGTTTGATTCAGA
CGCTTTAATCGCATCTCAGAAACGCAGAGCAATCGCGTTTTCTCCGGCGTCATTAATCGA
CGCAGAGTTAGTTTCACAGATCCAACAGCAAAACTCAGAAATCGATAGATTCGTAGCGCA
ACAAACGGAAACGTTGAGAATCGAATTAGAAGCGAGACAAAGAACGCAAACGCGGATGTT
AGCGTCAGCGGTACAAAACGCGATATTGAAAAAGCTGAAAGCGAAAGACGAAGAGATTAT
AAGAATGGGGAAATTAAACTGGGTTTTACAAGAACGTGTGAAGAATCTCTACGTAGAGAA
TCAGATCTGGCGTGATTTAGCACAAACTAATGAAGCTACTGCGAATAATCTCAGATCAAA
TCTCGAACAAGTTTTGGCTCAAGTTGATGATTTAGATGCGTTTCGTCGTCCTTTGGTTGA
AGAAGCTGATGATGCAGAATCTAGCTGTGGAAGCTGTGACGGAGGTGATGTAACGGCGGT
TGTTAACGGAGGATGTAAACGGTGCGGTGAGTTAACGGCGAGTGTGTTGGTGTTGCCTTG
TCGTCATTTGTGTTTGTGTACGGTTTGTGGATCGTCGGCTTTGTTGCGGACGTGTCCTGT
ATGTGATATGGTCATGACTGCTAGTGTACATGTTAACATGTCATCATGACCATTTTTTTC
GTTTTTAAATTTATTTTGAAGTTAAATTTTTTAGTTTTATTGTTTTGATTTGAGGATTAA
AGAGTAAAAATTAGGTGAAAAACAAAAGAAGAAGAAATGTGACTCTTTTTTGACTTTTTT
TGGAGACTTATAAAGATGGATTTGATTCATTATTTGTTTGTAGTTTTTGTATATTTCTTA
TTTTGGTAATGACAATTTGTTTTCCTTCATTCGTACGGAATCAATGCGATCTCTTTGACT
TTGAATATATTATGTAACCGTGATAATTAAAAATATGTACGTAATTAGGATCATT     
3' downstream sequence
aaacgaaaaaaattgtttcaaattttagagttaaagaatgttataatcct..........