Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: AT4G03190.1 GRH1-201

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Description

GRR1-like protein 1 [Source:NCBI gene (formerly Entrezgene);Acc:828045]

Location

Chromosome 4: 1,404,887-1,407,402 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 17 domains and features, is associated with 200 variant alleles and maps to 40 oligo probes.

Gene

This transcript is a product of gene AT4G03190 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
GRH1-201	AT4G03190.1	2324	585aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UXT3 Q9ZR12	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Exons

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Download sequence

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence
UTR

Markup

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........tttgaaactgaagcataagtaaaatactaattaacgaatctgacatcatg
1	AT4G03190.1.exon1	1,407,402	1,406,603	-	2	800	TGTGAACTGGGTAATACCATAAATGATTAGATCCACGAGTTCTCACACAGACTTACATGT GATGGATCACAGAGTAAACTAATTATGATTAAGGAAACTAATTATATTAGTGAGCTATAC ACAGTAGGCTCACATGGGTGCAAGCTCAACTTTATTAATGGTCTCACATGGACACTGTCT CCTTCGATTCTCTTGTCTTGTCATACTCTTTCTTGTCTTCCACTTGCTCTGTTTATATAT ATCAAAAGCTTCAATCTTTCGATTTAGATCACACTCATATCGAATCAAAATCTCAAACCT TTTTCTTCATTTCTTCCCCCCTCTCTCTCTCTCACTCTGTTTCTGATGGGTCTCCGATTC CCACCTAAGGTGTTGGAACATATCCTCTCCTTCATTGATTCCAACGAGGACCGGAACTCT GTTTCTCTGGTCTGCAAGTCATGGTTTGAGACAGAACGGAAGACTAGGAAGCGAGTCTTT GTCGGAAACTGTTACGCGGTCAGTCCTGCTGCGGTTACACGACGGTTCCCGGAGATGAGA TCTTTGACTTTGAAGGGGAAGCCACACTTCGCTGACTATAATCTCGTTCCTGATGGTTGG GGTGGTTATGCTTGGCCGTGGATTGAAGCTATGGCGGCGAAAAGTTCGTCTCTTGAAGAG ATCAGAATGAAGAGGATGGTGGTGACTGATGAGTGCTTAGAGAAAATTGCTGCTTCGTTT AAGGATTTTAAAGTCCTTGTGTTGACTTCTTGTGAAGGTTTCTCTACTGATGGTATCGCT GCTATTGCAGCTACTTGCAG
	Intron 1-2	1,406,602	1,406,493			110	gttcggttccaaccaaatacaaaaa..........tgttgttgtctgattttcaatatag
2	AT4G03190.1.exon2	1,406,492	1,406,000	2	0	493	GAACTTGAGAGTGTTGGAACTACGAGAGTGTATTGTTGAAGATTTAGGAGGAGATTGGCT TAGCTATTTTCCAGAGAGTTCAACTTCTTTGGTCTCTCTTGACTTCTCTTGTTTAGATTC TGAGGTTAAAATCTCGGATTTAGAGCGTCTTGTGAGCAGATCTCCAAACTTGAAGTCTTT GAAGTTGAATCCAGCTGTGACTCTAGATGGACTCGTTAGCTTACTTCGTTGTGCTCCACA ACTGACTGAGCTCGGCACAGGTTCTTTCGCAGCTCAATTGAAACCTGAAGCGTTTTCAAA GTTATCAGAAGCTTTTTCAAACTGTAAGCAACTTCAGAGCTTATCTGGTCTCTGGGATGT CCTCCCTGAATATCTTCCAGCTCTTTATTCTGTCTGTCCTGGTCTTACCTCGTTGAACTT GAGCTACGCTACTGTCCGAATGCCTGATCTTGTTGAGCTTCTTAGGCGATGCTCGAAACT GCAGAAGCTATGG
	Intron 2-3	1,405,999	1,405,918			82	gtgagtattttacatttttcaagac..........ttactagtgagacattttttggtag
3	AT4G03190.1.exon3	1,405,917	1,404,887	0	-	1,031	GTGATGGACTTGATTGAGGACAAAGGTCTTGAAGCTGTTGCCTCATATTGCAAGGAACTG CGAGAACTGAGGGTGTTTCCATCTGAGCCAGATCTTGATGCAACCAACATACCTCTGACG GAACAAGGCCTGGTCTTTGTGTCTAAAGGCTGTCGAAAGCTTGAGTCTGTTCTCTACTTC TGTGTCCAGTTCACAAACGCAGCTTTGTTTACCATAGCAAGAAAACGTCCGAATCTCAAG TGCTTCCGTCTCTGTGTGATAGAGCCATTTGCTCCTGATTACAAAACAAATGAGCCACTT GATAAAGGATTCAAAGCCATAGCTGAGGGATGCAGGGATCTTCGACGGCTCTCCGTCTCT GGTCTTCTCTCTGACAAGGCCTTCAAATACATTGGGAAACATGCCAAGAAGGTTAGGATG CTATCAATAGCATTTGCTGGGGACAGTGATTTGATGCTTCATCACTTGTTGTCGGGCTGT GAGAGTTTAAAGAAGCTTGAGATACGAGACTGCCCTTTTGGAGACACTGCACTACTGGAG CACGCTGCCAAGCTAGAGACCATGCGATCCCTTTGGATGTCATCTTGCTTTGTAAGTTTT GGTGCTTGCAAGCTTCTAAGTCAGAAAATGCCAAGGCTCAATGTCGAAGTCATTGATGAA CATCCTCCAGAGTCAAGACCTGAGAGCTCTCCAGTTGAGAGGATATACATATACAGAACA GTCGCAGGACCGAGAATGGATACGCCTGAATTTGTGTGGACGATACACAAGAATCCTGAG AATGGAGTTTCACATCTAGCCATAAAGTAAACTTGCTGCTTCAGTCATATTTTCCTTTCC ATCTTCAGTTTTTGCAGACATTGTTGTGGGAGAGATTCACCTTCCATTTGTTCCCTTTCA TATTGTTTTTACTAAGATATTAGAATATCAGTGATAGAAGCATTTCATAGCTTGTACTCT GTTAAACAAACAAAACCTTGTGTTTGGAATAAAATTATCATTTTATAAGATTTATAGTAA AAGAAGTTTGT
	3' downstream sequence						aaagaaacatctaaaatcatgagctaaacggtaaggcctagcaaaaaact..........

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