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    Transcript: AT2G47970.2 AT2G47970-202

    Description

    Nuclear pore localization protein NPL4 [Source:NCBI gene (formerly Entrezgene);Acc:819409]

    Location

    Chromosome 2: 19,629,474-19,631,138 forward strand.

    About this transcript

    This transcript has 1 exon, is annotated with 8 domains and features, is associated with 114 variant alleles and maps to 41 oligo probes.

    Gene

    This transcript is a product of gene AT2G47970 Show transcript tableHide transcript table

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    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • RefSeq
    • Flags
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    NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
    AT2G47970-201AT2G47970.11765413aa
     
    Protein coding
    		A0A178VXH4 O82264 -Ensembl Canonical
    AT2G47970-202AT2G47970.21665354aa
     
    Protein coding
    		---

    Exons

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    Exons/ Introns
    • Translated sequence
    • Flanking sequence
    • UTR
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    • No.
    • Exon / Intron
    • Start
    • End
    • Start Phase
    • End Phase
    • Length
    • Sequence
    Download what you seeDownload whole table
    No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
    5' upstream sequence 
    ..........caaacatttacagtatttgtttataacgggggctaagtagagaatcatga
    1AT2G47970.2.exon119,629,47419,631,138--1,665 
    GAAGATTAAAATCCCTAAAAGTTTTGGGGGAAAGAAGAAAGAAGGAAGACGATGATGATG
CTCAGAATCCGAAGCAGAGATGGACTGGAGAGAGTCACAGCGGAGGGAGCTCATATCACT
GTTTCCCAGCTCAAAACCTTGATCGCGGATCAGCTTCAGATCCCTCTCCATAAGCAGACC
TTATCCACCAATCGTGATCTCCTCCTCGCCAAAACTCCCGCTGATCTACTCGCCTTCACC
GACCTCACGGACCCAAACCTCCCCCTCTCCTCTCTCAACCTCGGCCATGGCTCTATGCTC
TACCTCGCCTACGATGGCGAGCGCTCCATTCCTGGAGCTCCTCCCGTTACTCCTGCCGGA
TCCTTCGGGAGGAAGATGACCGTCGATGACTTGATCGCCCGCCAGATGCGCGTCACTCGT
CAGGAGACGTCTCACTGCGACTCCGTCTCCTTCGATCGCGATGCCGCCAACGCTTTCCAG
CACTACGTCAATGAGTCTCTAGCTTTTGCCGTCAAGCGCGGCGGCTTTATGTACGGCACC
GTCACCGAGGAAGGACAGGTGGAAGTTGATTTCATTTACGAGCCGCCCCAGCAAGGCACG
GAGGCTAATCTTATTCTGATGAGAGATGCTGATGAAGAGAAGCGCGTGGACGCAATCGCC
ATGGGCTTGGGGATGAGGAGGGTCGGTTTCATTTTTAACCAGACCGTGGTGCAGGACAAG
ACTGAATACACTCTGTCCAACGCCGAGGTGCTACAGGCGGCGGAGCTTCACGCCGAGAGC
GAGCTGAAGGAGTGGGTCACGGCGGTGGTGAAGCTTGAGGTGAATGAGGATGGTGGCGCC
GATGTCCATTTCGAGGCGTTTCAAATGAGTGATATGTGCATCAGGCTGTTCAAGGAAGAG
TGGTTCGAGACGGAGATTATGCCGGACGATGATCCAAAGCTCTCTAAGATGAAGAAGGAG
GTGGTTGTTGGTGTGAAGGATCTTAAGGAGGTAGATAACGATTTCTTCCTCGTTCTCGTC
AGGATCTTGGATCACCAGGTTCGTGTTTTTCTCTCTACCCTTCCTTTGCATCAATCATCA
TTGTTCTTTGTACTAATGCTCTGCTTGGGCAAATAAAGTAATTGAATCTGGAGCTTTTAA
GTCTTAGGTTAATGAAGCTTGTCAGTGTTTGCTTTCCATGAGATAATTGAAAATTAGCAT
TTCGTCAATGGTCCCTGTGTTTTAACATTAGGCTGCTGTGATCAGGGGCCTCTGTCATCA
ACATTCCCAATAGAGAACCGGAGCAGTCGAGCAACGATGCGGGCTCTAAAAACACATCTG
GACCGGGCAAAGAGCTTGCCGTTGGTGAAGAAGATGTCAGATTTTCATCTGCTTCTCTTT
GTGGCTCAGTTTCTGGACGTGTCATCGGACGTCCCTGCTTTAGCCGAGTGTGTGCGTCTG
CAGTCGCCTGTCCCAGAGGGCTATGCGTTGCTCATCGAATCAATGGCCAACACTTGTTAA
TTTTTGTGTCATTGTTTTTTGGTTCTTGATACAGTATATCATGTTCGTTTTATGGTCCAG
AAAATCTTTTTTACTAGTTGACAAATGAAAAATCTCTAGTGTACTCGTGATGTATTTGAT
TCAAGTTTGGGGGTTAATTTAAGTTATCAACAACTTGTAGAAACA
    3' downstream sequence 
    aagttaattcacagagtaataaatcattctaataggtatgctcaggggca..........

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