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    Transcript: AT2G45910.2 AT2G45910-201

    Description

    U-box domain-containing protein kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:819199]

    Location

    Chromosome 2: 18,894,030-18,898,528 forward strand.

    About this transcript

    This transcript has 10 exons, is annotated with 28 domains and features, is associated with 277 variant alleles and maps to 46 oligo probes.

    Gene

    This transcript is a product of gene AT2G45910 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • RefSeq
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
    AT2G45910-202AT2G45910.13157834aa
     
    Protein coding
    		A0A5S9X7C1 Q8GUH1 -Ensembl Canonical
    AT2G45910-201AT2G45910.22919834aa
     
    Protein coding
    		A0A5S9X7C1 Q8GUH1 --

    Exons

    Download sequence
    Exons/ Introns
    • Translated sequence
    • Flanking sequence
    • Intron sequence
    • UTR
    Markup
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    • No.
    • Exon / Intron
    • Start
    • End
    • Start Phase
    • End Phase
    • Length
    • Sequence
    Download what you seeDownload whole table
    No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
    5' upstream sequence 
    ..........tactgtgtgtgtgtccacagcagataaataaacctcttctttcatgttct
    1AT2G45910.2.exon118,894,03018,894,087--58 
    CGACCACGTCAGATTTTTTAGCAGCAAAGCACACAAATCCCCAAGAAGCTTCGTTTTG
     Intron 1-218,894,08818,894,479392 
    gtatgttaaagtaaaatcgaataaa..........ttgtttcgttgttttgtggttttag
    2AT2G45910.1.exon218,894,48018,894,784-1305 
    ATATCAAACGATCTGGTTTGTCGGATTTGATATTGGAGCAATGGCTTTGGTGAGTCCAAT
TCCAGCAATGGGTGAAAGAGCTGGATCCATGAGATTTCACGGAATTGGTAGCCCAGGATC
AAGGTCTAGTAGGAGCGGGATTATGGACGAACCTGTCTCGCGGCTGATTGACGAGAAGAT
CTTCGTTGCAGTGGATAAACACGTGGCCAAGAGCAAATCTACACTCATTTGGGCTTTGCA
AAACACTGGAGGCAAGAAGATTTGCCTTATTCATGTTCATCAGCCCTCCCAAATGATCCC
ACTTA
     Intron 2-318,894,78518,894,87692 
    gtatgttcccttacaccttgtctct..........gttttttcacattgattcatcctag
    3AT2G45910.1.exon318,894,87718,894,99810122 
    TGGGCGCCAAATTTCCAGTTGGTGCTGTGAAGGAGGAAGAAGTCAGGGTTTTCAGGGAAA
AGGAAAGGGAGAAAGTACATATGATCCTAGACGACTACCTTCGTATATGCCAGCAGAGAG
GG
     Intron 3-418,894,99918,895,127129 
    gtatgcctccatctattttcctttt..........atagatagtgtatttatgattgtag
    4AT2G45910.1.exon418,895,12818,895,24902122 
    GTCAGGGCAGAAAAGATGTTTATTGAAATGGAATCCATCGAGAATGGAATTGTGCAGCTC
ATCTCGGAGCTGGGAATCAGGAAACTTGTCATGGGAGCAGCAGCAGATAGACACTATTCA
AG
     Intron 4-518,895,25018,895,386137 
    gtatgcttatggcgagtcactaagc..........cctctatcaatactttggctttcag
    5AT2G45910.1.exon518,895,38718,895,49122105 
    GAGAATGACGGATCTGAAGTCCAGGAAAGCCATCTTCGTACGCCGAGAAGCACCTACTCT
TTGTCAAATATGGTTTACTTGCAAAGGATACTTGATACATACAAG
     Intron 5-618,895,49218,895,670179 
    gtttggccaattcttcttctcatca..........aataaatattgtactatcattgcag
    6AT2G45910.1.exon618,895,67118,895,96820298 
    GGAAGCTACTATGGACGACACTGAATCAGAATATGCATCTCCGCGTCCTTCCATAAGTGC
AAGTGATCTACTTCAAACTTTCTCTACACCGGAGTCTGAACATCAGCATATATCTCGAGT
ACAGAGCACCGATTCAGTTCAACAATTAGTAAGCAATGGAAGCTCAACTGAACAAAGCGG
GAGGGTGTCGGATGGGTCTTTAAATACTGATGAGGAGGAGAGAGAATCTGATGGCAGTGA
AGTAACGGGAAGTGCAACAGTTATGAGTTCTGGCCATTCATCTCCCTCCAGTTTTCCG
     Intron 6-718,895,96918,896,06294 
    gtatgccatgttgttcctaatggaa..........ccaggaaatttgtccatcattgcag
    7AT2G45910.1.exon718,896,06318,896,19700135 
    GATGGGGTGGATGATTCTTTTAACGTTAAAATCCGAAAAGCCACGTCAGAGGCTCACAGT
TCAAAACAAGAAGCTTTTGCAGAGACTCTTAGGCGTCAGAAAGCCGAAAAAAACGCACTT
GATGCAATCAGAAGG
     Intron 7-818,896,19818,896,404207 
    gtgagtttccttacaaaaataattt..........ctgatattataggtaattattatag
    8AT2G45910.1.exon818,896,40518,896,92900525 
    GCTAAACAATCAGAAAGTGCCTATTCTGAGGAATTGAAGCGAAGGAAAGATACGGAGATA
GCAGTAGCGAAAGAGAAAGAGAGATTTATAACAATAAAAAACGAGCAAGAGGTGATCATG
GAAGAACTTCAAAGTGCAATGGCTCAGAAAGCGATGCTTGAGAGCCAGATAGCAAAATCT
GATGGTACAATGGAAAAGCTAAACCAGAAGCTTGATATAGCTGTGAAGTTGTTGCAAAAG
TTGAGGGATGAACGAGAGGAGTTGCAGACAGAACGTGACAGAGCACTCAGAGAAGCTGAG
GAGTTAAGGAGTCACGCAGAAACCTCAACCCTACAGTTGCCTCAGTACTTCACGGATTTC
TCATTCTCCGAGATTGAGGAAGCAACTAATCACTTTGATTCGACCCTGAAGATTGGGGAA
GGTGGATATGGAAGCATCTACGTTGGTTTACTGCGTCATACTCAGGTGGCTATAAAAATG
TTGAATCCTAACAGTTCGCAAGGCCCTGTAGAATATCAACAGGAG
     Intron 8-918,896,93018,897,112183 
    gtattttcttgacatattattagtg..........ttgacttattcttgcggcattgcag
    9AT2G45910.1.exon918,897,11318,897,85900747 
    GTTGATGTCCTAAGTAAAATGAGGCATCCAAATATCATTACGCTAATTGGAGCATGTCCA
GAGGGGTGGAGTCTTGTCTATGAGTATCTTCCGGGTGGAAGCCTTGAAGACAGGCTTACT
TGCAAAGACAACTCTCCACCCTTGTCGTGGCAAAATCGTGTGCGCATTGCCACTGAGATA
TGTGCAGCACTTGTCTTTCTTCATTCTAATAAAGCTCATAGCTTAGTACATGGTGATTTG
AAGCCGGCAAATATCCTACTCGATTCCAATCTCGTTAGCAAGTTAAGTGACTTTGGGACC
TGCTCACTACTTCATCCTAACGGAAGCAAAAGTGTGAGAACTGACGTTACAGGCACAGTT
GCCTATTTGGATCCAGAAGCTTCCAGTAGTGGAGAGCTAACTCCTAAGTCAGATGTTTAC
TCGTTTGGGATTATCTTATTGCGCTTGTTGACCGGGAGACCTGCCTTACGGATATCAAAT
GAAGTGAAATATGCCCTCGATAATGGAACATTGAACGACCTCTTGGACCCTTTAGCAGGG
GACTGGCCCTTTGTTCAGGCTGAGCAGCTTGCTCGCTTAGCATTGAGATGCTGCGAGACT
GTCAGCGAGAATCGTCCAGATCTTGGAACTGAAGTGTGGAGGGTACTTGAACCTATGAGG
GCTTCTAGTGGAGGATCTTCATCTTTCCATCTTGGCCGTAACGAGCACCGGATAGCCCCT
CCATACTTCATTTGCCCCATTTTCCAG
     Intron 9-1018,897,86018,898,026167 
    gtaactaatctgtatatttgagtat..........tctgctttgttttcaaatatttcag
    10AT2G45910.1.exon1018,898,02718,898,5280-502 
    GAAGTCATGCAGGATCCACACGTGGCTGCAGACGGTTTCACATACGAAGCAGAGGCTATA
AGAGCGTGGCTGGACAGTGAGCATGATACTTCACCAATGACCAATGTCAAGCTTTCTCAC
ACCAGCCTAATAGCTAACCATGCTCTTCGTTCTGCGATTCAAGAGTGGCTTCAACATCAT
TTGTGAAAATAAAATCCTTCAAACCCTCAATCCCTGTTCTCTTATGAAAAAACGTTTTTG
CCTTTTCTGCGGGAGGCAACAGAGTAAGTGAGTAAGATTAGTGTTTTCAGTCTTCCTTAT
ACATATACATACGATCTAATCATGGATAGCAGCATATTTGTTTACTTTTTCAAGCATAGT
GTAAGTCCTCCATATCAGTCATATATGAAAAGAAGAAGCTGGTGAGATTTGTATGTGGAT
ATGTATATATATATATATATATATATATATATATATATGTTCTGTATGAAAAAAAAAGTT
ATATGCTTATTCGGTTTGTGTG
    3' downstream sequence 
    agaagaactgccactattttgttcttccattatgttcggctctcttaaga..........

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