Arabidopsis thaliana (TAIR10)
Description

ENTH/VHS family protein [Source:NCBI gene (formerly Entrezgene);Acc:818918]

Location
About this transcript

This transcript has 14 exons, is annotated with 17 domains and features, is associated with 420 variant alleles and maps to 39 oligo probes.

Gene

This transcript is a product of gene AT2G43160 Show transcript tableHide transcript table

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
AT2G43160-202AT2G43160.13647895aa
 
Protein coding
A0A5S9X736 Q67YI9 -Ensembl Canonical
AT2G43160-201AT2G43160.33618895aa
 
Protein coding
A0A5S9X736 Q67YI9 --
AT2G43160-205AT2G43160.23345895aa
 
Protein coding
A0A5S9X736 Q67YI9 --
AT2G43160-203AT2G43160.53098895aa
 
Protein coding
A0A5S9X736 Q67YI9 --
AT2G43160-204AT2G43160.42985646aa
 
Protein coding
---
Exons/ Introns
  • Translated sequence
  • Flanking sequence
  • Intron sequence
  • UTR
Markup
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  • No.
  • Exon / Intron
  • Start
  • End
  • Start Phase
  • End Phase
  • Length
  • Sequence
No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
5' upstream sequence
..........ttcactatttcatttttatttatttattttatctgttgaattttctcttc
1AT2G43160.4.exon117,948,06217,948,270--209
TGGCTGCTGTTTTCCTCTCTCTCTCTCTCTAAACTCGAGAATTTTTGTAGAGAGAGGAGG
CAAAGTGCGAAAGCTAAACGCAGATCCACGATCAATCTCCTCCACCTTCAAAAGCCTTCA
AAAGTGTTTCTTCTTCGTCTTCTTCCTTTTATTATCTGTGCCTTGACAGATCCACGATCC
GATTCTGGTCAAATTTTACATTTCTGCAG                               
 Intron 1-217,948,27117,948,797527
gtacgatcttagctctttttgttct..........atatctttgtttgaaacgttaatag
2AT2G43160.1.exon217,948,79817,948,918-2121
ATAAGCTGCTCATACTAGTTATACAACAGACTCCATAGAAGGTGACATTTGTTTAAGATA
CTCTTGTTCCTGGAACACATACGAAGATGAAGAAAGTCTTCGGACAAACTGTTAGAGACC
T                                                           
 Intron 2-317,948,91917,949,021103
gtaagtattttcgtacccgaaattt..........ttcattttatgttccatttattcag
3AT2G43160.1.exon317,949,02217,949,0732052
TAAGAGAGAGGTCAACAAGAAAGTGCTCAAAGTTCCTGGAGTAGAACAGAAG        
 Intron 3-417,949,07417,949,312239
gtaatggatgctcttagcttcttct..........tttgtctgtgctttctcttattcag
4AT2G43160.1.exon417,949,31317,949,3920280
GTTCTAGATGCTACTAGTAATGAGCCATGGGGTCCACATGGATCACTTCTTGCTGATCTT
GCGCAAGCTTCCAGAAATTA                                        
 Intron 4-517,949,39317,949,48189
gtaactacgaccaccttccaacttg..........taaaaacatgttacttctatttcag
5AT2G43160.1.exon517,949,48217,949,5602079
TCATGAATATCAGCTGATCATGGTGGTCATATGGAAACGCCTTAGCGACACCGGAAAAAA
CTGGCGGCATGTCTATAAG                                         
 Intron 5-617,949,56117,949,65999
gtaaacaatattattgtcttgctgg..........tttacctcttctctctccccttcag
6AT2G43160.1.exon617,949,66017,949,7430084
GCTTTGACAGTTTTGGAGTACATGGTAGGCCATGGATCAGAACGTGTTATAGACGAGATT
AGAGAACGTGCATATCAAATTTCG                                    
 Intron 6-717,949,74417,949,861118
gtaatgactaccttgagtacattat..........tatatgtctattttccttgtggcag
7AT2G43160.1.exon717,949,86217,950,00702146
ACATTGTCCGATTTTCAGTATATTGATTCCGGTGGTAGAGATCAAGGAAGCAATGTTAGG
AAGAAATCACAGAGCCTGGTGGCTTTGGTGAATGACAAGGAAAGAATAGCTGAAGTCAGA
CAGAAGGCTGCTGCTAATAGAGATAA                                  
 Intron 7-817,950,00817,950,274267
gtaagtttgcttgtcattgtatctt..........atcaacctacattattttacaacag
8AT2G43160.1.exon817,950,27517,950,57722303
GTATCGCAGCTCAGCACCAGGTGGGATGTATAAGCCTTCAGGCGGATATGGGGATAAATA
TGATTACGGAAGCCGGGATGAAGAGCGAAGTAGTTATGGAAGAGAAAGAGAATATGGTTA
CAGAGATGATGATAGAAATAGTCGTGATGGAGATCGTCATTCCAGGGACTCTGAAGACCG
GTATGGGAGAGATGGTAATAGGGATGATGATTACAGGGGAAGGAGCAGAAGTGTTGATAA
CTATGGGTCACGAGGTAGGAGTTCGGAAAGAGAGCGGGAGGATGATGGCCATTCTTCATC
ACG                                                         
 Intron 8-917,950,57817,950,783206
gtatgttaaatttcaagtcgcctaa..........ggatacactcctttttgtcctgtag
9AT2G43160.1.exon917,950,78417,950,8252242
GGGCAGTGGTGCTCGAGCTGATGATAATTCTCAGGATGGGAG                  
 Intron 9-1017,950,82617,950,91388
gtaatttctgataaatttctactga..........ccttctttcgggattataatggtag
10AT2G43160.1.exon1017,950,91417,951,0122299
AGGGGGGCTCCAGAGGAAGTTTTCTGAACAAAATATTGGCGCTCCACCCAGTTATGAAGA
AGCTGTCAGTGATTCACGCAGCCCTGTATATAGTGAAAG                     
 Intron 10-1117,951,01317,951,08573
gtgatcattttctgctttgaaaatt..........gtgctgatgaatctttctatgccag
11AT2G43160.1.exon1117,951,08617,951,27921194
GGATGGTGGGGAGACCCCACAAGTTACCGCTCCAGGAGCTGCTTCTCCTCCTCCCCCACA
AGTTGCTGCTCCAGAGGCTGCTTCTCCTCCAACTGGAACCAACACAGCCAATACAACTGC
TACTTTTGTTAATGAATCACCTTCTCAGAAAGTTGAGACTTTCGATGAATTTGATCCACG
CAGTGCGTTTTCAG                                              
 Intron 11-1217,951,28017,951,526247
gtacagaatactcaaactcttgcaa..........ccgttgtgttcctttacttttccag
12AT2G43160.1.exon1217,951,52717,951,76210236
CTGGCCCTCCAGCATATGCATCTACAGATGGTGTTACAGCTCCTCCAACTGTGACTTCTA
TGTCTGCCCCTACCACCTCAAACAGTGTTGAGATGGACTTGCTTGGTTCCCTTGCAGACG
TATTTTCATCAAACGCATTGGCCATTGTACCAGCTGATTCTATCTATGTTGAAACCAATG
GACAAGCAAACGCTGGTCCAGCTCCATCGTTTTCTACATCTCAGCCATCAACTCAG    
 Intron 12-1317,951,76317,951,84078
gtatatacactgagcttggagtatg..........gatgactgttgtttggattatgcag
13AT2G43160.4.exon1317,951,84117,952,41900579
TCATTTGATGACCCATTTGGTGACTCTCCTTTCAAGGCCTTCACTTCTACTGACACCGAC
TCAACCCCACAGCAGAATTTTGGAGCTTCTTTCCAGCCACCACCTCCAGCCTTCACTTCA
GAGGTCTCACATCCTGATACTGCTCATAACTTTGGCTTTGGGGACTCATTTTCCGCCGTT
GCCAATCCTGATCCTGCTTCTCAGAATGTGCAACCTCCATCGAACTCACCAGGTTTTCCT
CAAGAGCAATTTGCTACATCTCAGAGTGGTATTGATATCCTCGCTGGCATTCTCCCACCA
TCTGGACCTCCAGTACAATCGGGTCCCTCAATACCAACATCTCAATTTCCTCCCAGTGGA
AACAACATGTACGAGGGATTTCATTCTCAGCCGCCGGTATCTACAGCTCCAAACCTGCCT
GGACAAACTCCATTTGGACAAGCTGTTCAACCATATAACATGGTTCCTCATTCTCAAAAT
ATGACTGGAGCCATGCCATTTAATAGTGGAGGCTTCATGCACCAGCCGGGCTCACAAACT
CCTTACTCTACCCCAAGTGGACCAGCTGGTCAGTTCATG                     
 Intron 13-1417,952,42017,952,908489
gcacaccaaggtcatggaatgccgc..........aatatgggtaaagccatgggatcag
14AT2G43160.4.exon1417,952,90917,953,6690-761
GCACTGGCTTAGGGCGTTCTGGTGCAACTGCTATGAGACCTCCACCTAATCCAATGACAG
GCTCTGGCATGCCCATGGGCGGAGGAATGGGTGTTGGTAGCTACGGAGGTATGAACCAGA
ACCAACCCATGGGTATGGGTATGGGGGCCGGAATGAACCAAAACCAACCGATGGGTATGG
GAATGGGACCCGGCATGAACATGAACATGAACATGGGAGGATATGGCCAAGGCTATCCGA
TGCAACCACAAAACCCAGGGATGGTACCTAGCCCAAACATGCCTGGCAATAACTACAATC
CGATGATGGGTCAAGGTGGTTACAACCCTCAACAATCCTATGGTGGTGGATACCGGTAAG
ATCAAGCCAAACATGATGCACTTGACTTCATTCGTGTAATCAAGAATACGCTCGCCTGTG
CTTTTTCTTTACTCTGGGATATGTAATATCAGTCGATAAAAGTACTCAGGTTACATTATT
CATCCAGGCAACACGGCTCCACGAATTTTCTTCTCTGTTTGTTCTTGCCTTACTCGTCAC
TCATCATTCATTTTTATTTTTTTCTGGTTTGGACCAAATTGAGAGCTTGTTGTGAAATTT
GTACCAGTGTGAGAGTGGCAAACCTTGCTCGGGTCTGCCCTTTTTTTGTTATATGCATAT
AATTTGATATATACACATTCACTTCTATTTCTTTATTTTGAAGATGTGTAATACATTTCT
CATTCACGGAACAAATAAAATCTTTACATTTTTGTATTCTC                   
3' downstream sequence
tttttaaatgtttcccggctgtatttactttttcttcactaggtgtgtgt..........