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    Transcript: AT2G33000.1 AT2G33000-202

    Description

    ubiquitin-associated (UBA)/TS-N domain-containing protein-like protein [Source:NCBI gene (formerly Entrezgene);Acc:817862]

    Location

    Chromosome 2: 14,006,135-14,008,537 forward strand.

    About this transcript

    This transcript has 5 exons, is annotated with 11 domains and features, is associated with 167 variant alleles and maps to 40 oligo probes.

    Gene

    This transcript is a product of gene AT2G33000 Show transcript tableHide transcript table

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    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • RefSeq
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
    AT2G33000-202AT2G33000.11802508aa
     
    Protein coding
    		F4IUT4 -Ensembl Canonical
    AT2G33000-201AT2G33000.21916368aa
     
    Protein coding
    		A0A1P8AX64 --

    Exons

    Download sequence
    Exons/ Introns
    • Translated sequence
    • Flanking sequence
    • Intron sequence
    • UTR
    Markup
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    • No.
    • Exon / Intron
    • Start
    • End
    • Start Phase
    • End Phase
    • Length
    • Sequence
    Download what you seeDownload whole table
    No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
    5' upstream sequence 
    ..........ccctgccgtttttgtggattaattgcgttatacgacgtcctcttacactt
    1AT2G33000.1.exon114,006,13514,006,724-2590 
    TCACTCCAAACGACGCTGTTTTAAGCAAGAAACTCCATCGTCTTCTTGGCAAAATTCTGG
ATGAAAGAAAGTAGAAGTCCCGCCCAAATTGGGGACGAACACCTTTCACCAACGGCGAAG
GCTGATCTGATTGATAGAATCTGCGCTGAACTTGGAGTATGTGAAGAAGAAGCACTTTGT
TACCTTGATGGATTCCACTGGGATTTTGATTCGGCGTTGGAGGCTTGCCGCAACCAAACC
TCTCCGTTTCCGCCGTCCCTCACAGTTGAATCTACGCCGGTGAACGCTAACTCCGCGTCG
TTGACAACTCCATTAATGATCGATCCTCTTCGGAGTTGGAATCCGCCGGATGAACAATCG
AGAAATGAAAGTATCGCACGATTTTGCTACGCGGTTGCTGGAGTTAGTGTAGAAGAGGCA
CGCGCTTACCTCGAGCGAAGCAATTGGAATATAAACCTAGCCGTCGACAGTTTCTTGGTC
GAGCGCCGTGCAACGCCTCTTCAAAAGAAGTCGAATCCTCTACGATTAGATTCAAAATCG
CGGTTTCTAGATTACTCGAAACCACTCAGAATCGGGAGATCTTCTTCTGA
     Intron 1-214,006,72514,006,838114 
    gtatggatttgtttcgtatataagt..........ttagccattttcttacctttgacag
    2AT2G33000.1.exon214,006,83914,006,9142076 
    CTCGATGGAAGTTGACTCGACAGGAGAACAGATCCCTGAAGCTATACCACCTCTAATGGC
GTCATCTCAAGTCAAT
     Intron 2-314,006,91514,007,095181 
    gtactgtaatcttctccttctctgc..........cactgcttacattttctccattcag
    3AT2G33000.1.exon314,007,09614,007,59202497 
    ACTCAAGAAAACCAGGAAAGTACTAGTGTTTGGCCGCCGATGAAAACTTGGGTTGATCGA
ATCTGCCATGAAACCAAAGTGTCTCGAGAAGAAGCATTCTATTACCTTGAGGGATCCAAG
TGGAATTTCAGTCGGGCTGTGGAGGCTTGTCGCAGTAAAACCTTGCCGGTGGTTTCGGCG
AGCCAGGAATCTGCTGAGGCGCCGCCGAATTCGCCAGAGCAACCGTCTCTACTGAAAAAT
GAATGGATCTCTTCATTCTGCGAGGCGGCTAGTACAGCGACTAGAGAGGAGGCAATCTAT
TGCCTTAAAGTCTGCAACTGGGATGTACATCGAGCCATCGGCTTTTATATGGAGGACTTC
TCAGAGCATCAAACGTCAGTGGCAGTCAATATGAGTTTGAAGGAGAACAGAAAGCTGCCT
CTTTCATCCATCGAATTACCTTCTCAATCGCAGTTTGAGGCTTCACTTGGTTACTTGAAA
GAAGGAAGCACTTCTAG
     Intron 3-414,007,59314,007,708116 
    gtgatttgtccctttttcatttgcg..........tcccgccatttgattacttgtacag
    4AT2G33000.1.exon414,007,70914,007,81120103 
    TTTGTTGGAGGTTGATCCGACCGAGTTAAAAAGGTCACTCGAAGAGGCTGGTGAAGAAAA
CGCCGCAGTAGCTATTCCTAGAATGACATCGTCTCAAGTAGAT
     Intron 4-514,007,81214,008,001190 
    gtatgtaaccttctcttcctctgca..........ttttgttttgtcttttaacttgaag
    5AT2G33000.1.exon514,008,00214,008,5370-536 
    GGTAAGGGTATTGAGGAAGACTCAAGCATGGAGACATTCCCTGATCCTGTTGCCTACCAA
GACAGGATAATTGTGGGGCCTCGAGCTGGGGGGACTACTATTACATTGACTATCCTCTTG
GCCAATACGCGATCGGTAAATATTCCTTTTAGATCAAACCAAACTGTCAGAGACATCCGT
GATGCCATTGACGAGCTAACACCAGATTACGAGAAAGACTACATTTTGCAATCAATGGCT
GAAGTAGTTTACATGGATCCAGACATTACTGTACACGAAATATCTACTGGTTCTACAACT
CTCCTCCAGATCTACCTGTAGCTTTGGTTTTGTACAGTTTCCGTTGATTGATGAAACATA
GAGAGAAAGGAAACAGATGTATAGGACTTTAGAAAGGATTCTTGCCTTGTATAGAATGGA
AAAAATAGAACAGAGCAGCTTTGCACTTAGTTGTTTGAGATAGGAATGGATAAAGAGAGT
TTTCTTATACTGTATGGTACGAAACGATTAATGAAACATAGAGAGATTTGAAACAA
    3' downstream sequence 
    ccgttgttccttttatctctttgctgttaaactaaagaccttattatgat..........

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