Arabidopsis thaliana (TAIR10)
Description

ubiquitin-specific protease 22 [Source:NCBI gene (formerly Entrezgene);Acc:830946]

Location
About this transcript

This transcript has 3 exons, is annotated with 17 domains and features, is associated with 148 variant alleles and maps to 40 oligo probes.

Gene

This transcript is a product of gene AT5G10790 Show transcript tableHide transcript table

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
UBP22-202AT5G10790.12508557aa
 
Protein coding
A0A178UPE9 Q9LEW0 -Ensembl Canonical
UBP22-201AT5G10790.22203428aa
 
Protein coding
A0A1P8BG54 --

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
Superfamily13118-SSF57850-
Gene3D172537-3.90.70.10-
CDD177528-cd02660-
Superfamily175529Papain-like cysteine peptidase superfamilySSF54001IPR038765 [Display all genes with this domain]
Pfam177528Peptidase C19, ubiquitin carboxyl-terminal hydrolasePF00443IPR001394 [Display all genes with this domain]
PANTHER62531Ubiquitin carboxyl-terminal hydrolasePTHR21646IPR050185 [Display all genes with this domain]
PROSITE profiles177531Ubiquitin specific protease domainPS50235IPR028889 [Display all genes with this domain]
PROSITE patterns178193Ubiquitin specific protease, conserved sitePS00972IPR018200 [Display all genes with this domain]
Gene3D8128Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]
PROSITE profiles36130Zinc finger, UBP-typePS50271IPR001607 [Display all genes with this domain]
Pfam56115Zinc finger, UBP-typePF02148IPR001607 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
Seg6683
Seg313323
Seg465472
Seg512518
Alphafold1557
Alphafold1557