Transcript: AT4G15840.1 (AT4G15840-201) - Domains & features - Arabidopsis_thaliana

Description

BTB/POZ domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:827265]

Location

About this transcript

This transcript has 12 exons, is annotated with 16 domains and features, is associated with 459 variant alleles and maps to 43 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT4G15840-201	AT4G15840.1	2827	836aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JKX0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT4G15840-202	AT4G15840.2	2903	749aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B6W9	-	-

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	8	836	-	PTHR47369	-
Pfam	71	173	BTB/POZ domain	PF00651	IPR000210 [Display all genes with this domain]
PROSITE profiles	75	145	BTB/POZ domain	PS50097	IPR000210 [Display all genes with this domain]
SMART	75	175	BTB/POZ domain	SM00225	IPR000210 [Display all genes with this domain]
CDD	716	834	MATH/TRAF domain	cd00121	IPR002083 [Display all genes with this domain]
Gene3D	42	209	SKP1/BTB/POZ domain superfamily	3.30.710.10	IPR011333 [Display all genes with this domain]
Superfamily	69	173	SKP1/BTB/POZ domain superfamily	SSF54695	IPR011333 [Display all genes with this domain]

Transcript: AT4G15840.1 AT4G15840-201