Transcript: AT3G61390.5 (AT3G61390-205) - Domains & features - Arabidopsis_thaliana

Description

RING/U-box superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:825311]

Location

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 183 variant alleles and maps to 38 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT3G61390-202	AT3G61390.2	1708	435aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GZ84	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G61390-203	AT3G61390.3	1894	298aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LMB1	-	-
AT3G61390-201	AT3G61390.1	1803	373aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JE91	-	-
AT3G61390-204	AT3G61390.4	1675	360aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LMB3	-	-
AT3G61390-205	AT3G61390.5	1408	347aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LMB2	-	-

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
CDD	35	177	-	cd01989	-
Superfamily	53	146	-	SSF52402	-
Gene3D	24	155	Rossmann-like alpha/beta/alpha sandwich fold	3.40.50.620	IPR014729 [Display all genes with this domain]
PANTHER	34	327	U-box domain-containing ubiquitin ligases	PTHR45647	IPR051348 [Display all genes with this domain]

Feature type	Start	End
Ncoils	242	262
Ncoils	267	294

Transcript: AT3G61390.5 AT3G61390-205