Arabidopsis thaliana (TAIR10)
Description

plant U-box 22 [Source:NCBI gene (formerly Entrezgene);Acc:824410]

Location
About this transcript

This transcript has 1 exon, is annotated with 13 domains and features, is associated with 122 variant alleles and maps to 42 oligo probes.

Gene

This transcript is a product of gene AT3G52450 Show transcript tableHide transcript table

Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
PUB22-201AT3G52450.11811435aa
 
Protein coding
A0A178VML4 Q9SVC6 -Ensembl Canonical

Domains

Show/hide columns
  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
Superfamily480-SSF57850-
Gene3D93414Armadillo-like helical1.25.10.10IPR011989 [Display all genes with this domain]
Superfamily106407Armadillo-type foldSSF48371IPR016024 [Display all genes with this domain]
PANTHER3429E3 ubiquitin-protein ligase PUB22/23/24-likePTHR22849IPR045185 [Display all genes with this domain]
CDD861PUB protein, U-box domain, plantcd16664IPR045210 [Display all genes with this domain]
PROSITE profiles681U-box domainPS51698IPR003613 [Display all genes with this domain]
Pfam776U-box domainPF04564IPR003613 [Display all genes with this domain]
SMART1074U-box domainSM00504IPR003613 [Display all genes with this domain]
Gene3D184Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]

Other features

Show/hide columns
  • Feature type
  • Start
  • End
Feature typeStartEnd
Seg93108
Seg154166
Seg233241
Seg403414