Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: AT3G27260.2 GTE8-203

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Description

global transcription factor group E8 [Source:NCBI gene (formerly Entrezgene);Acc:822345]

Location

Chromosome 3: 10,067,529-10,072,760 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 38 domains and features, is associated with 368 variant alleles and maps to 43 oligo probes.

Gene

This transcript is a product of gene AT3G27260 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
GTE8-201	AT3G27260.3	3284	822aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LS77	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
GTE8-204	AT3G27260.1	3313	813aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9XG79 Q9LK27	-	-
GTE8-203	AT3G27260.2	3253	764aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JEZ0	-	-
GTE8-202	AT3G27260.4	3041	718aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LS78	-	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
SMART	120	230	Bromodomain	SM00297	IPR001487 [Display all genes with this domain]
Pfam	131	213	Bromodomain	PF00439	IPR001487 [Display all genes with this domain]
PROSITE profiles	139	211	Bromodomain	PS50014	IPR001487 [Display all genes with this domain]
Prints	142	155	Bromodomain	PR00503	IPR001487 [Display all genes with this domain]
Prints	158	174	Bromodomain	PR00503	IPR001487 [Display all genes with this domain]
Prints	174	192	Bromodomain	PR00503	IPR001487 [Display all genes with this domain]
Prints	192	211	Bromodomain	PR00503	IPR001487 [Display all genes with this domain]
Gene3D	93	234	Bromodomain-like superfamily	1.20.920.10	IPR036427 [Display all genes with this domain]
Superfamily	108	233	Bromodomain-like superfamily	SSF47370	IPR036427 [Display all genes with this domain]
PANTHER	21	653	Environmental Response Regulator	PTHR46136	IPR052442 [Display all genes with this domain]
PROSITE profiles	271	353	NET domain	PS51525	IPR027353 [Display all genes with this domain]
Pfam	281	343	NET domain	PF17035	IPR027353 [Display all genes with this domain]
Gene3D	275	352	NET domain superfamily	1.20.1270.220	IPR038336 [Display all genes with this domain]
CDD	127	225	Putative transcription factor GTE, bromodomain	cd05506	IPR037377 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	71	81
MobiDBLite	71	119
MobiDBLite	97	119
MobiDBLite	383	439
MobiDBLite	393	405
MobiDBLite	430	439
MobiDBLite	458	480
MobiDBLite	531	552
MobiDBLite	531	570
MobiDBLite	561	570
MobiDBLite	598	676
MobiDBLite	600	614
MobiDBLite	658	668
MobiDBLite	690	714
MobiDBLite	738	764
Seg	317	328
Seg	393	410
Seg	517	580
Seg	645	661
Seg	695	709
Seg	740	750
Ncoils	31	51
Ncoils	335	355
Ncoils	520	573

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