Transcript: AT3G24515.1 (UBC37-201) - Domains & features - Arabidopsis_thaliana

Description

ubiquitin-conjugating enzyme 37 [Source:NCBI gene (formerly Entrezgene);Acc:822045]

Location

About this transcript

This transcript has 6 exons, is annotated with 15 domains and features, is associated with 354 variant alleles and maps to 45 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
UBC37-203	AT3G24515.3	1524	434aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LLL0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
UBC37-202	AT3G24515.2	1572	286aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LLL2	-	-
UBC37-204	AT3G24515.4	1515	286aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LLL2	-	-
UBC37-201	AT3G24515.1	1463	409aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q941B6	-	-

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
SMART	9	165	-	SM00212	-
PANTHER	43	150	-	PTHR24068	-
PROSITE profiles	6	165	Ubiquitin-conjugating enzyme E2	PS50127	IPR000608 [Display all genes with this domain]
Pfam	10	159	Ubiquitin-conjugating enzyme E2	PF00179	IPR000608 [Display all genes with this domain]
CDD	10	160	Ubiquitin-conjugating enzyme E2	cd00195	IPR000608 [Display all genes with this domain]
PROSITE patterns	88	103	Ubiquitin-conjugating enzyme, active site	PS00183	IPR023313 [Display all genes with this domain]
Gene3D	1	165	Ubiquitin-conjugating enzyme/RWD-like	3.10.110.10	IPR016135 [Display all genes with this domain]
Superfamily	7	165	Ubiquitin-conjugating enzyme/RWD-like	SSF54495	IPR016135 [Display all genes with this domain]

Transcript: AT3G24515.1 UBC37-201