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Arabidopsis thaliana (TAIR10)
Description

bromodomain and extraterminal domain protein 10 [Source:NCBI gene (formerly Entrezgene);Acc:821083]

Location
About this transcript

This transcript has 9 exons, is annotated with 19 domains and features, is associated with 274 variant alleles and maps to 41 oligo probes.

Gene

This transcript is a product of gene AT3G01770 Show transcript tableHide transcript table

Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
BET10-201AT3G01770.12422620aa
 
Protein coding
A0A654F378 Q93ZB7 -Ensembl Canonical
BET10-202AT3G01770.22451489aa
 
Protein coding
A0A1I9LQQ3 --

Domains

Show/hide columns
  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
SMART122232BromodomainSM00297IPR001487 [Display all genes with this domain]
Pfam133216BromodomainPF00439IPR001487 [Display all genes with this domain]
PROSITE profiles141213BromodomainPS50014IPR001487 [Display all genes with this domain]
Prints144157BromodomainPR00503IPR001487 [Display all genes with this domain]
Prints160176BromodomainPR00503IPR001487 [Display all genes with this domain]
Prints176194BromodomainPR00503IPR001487 [Display all genes with this domain]
Prints194213BromodomainPR00503IPR001487 [Display all genes with this domain]
Gene3D117244Bromodomain-like superfamily1.20.920.10IPR036427 [Display all genes with this domain]
Superfamily120231Bromodomain-like superfamilySSF47370IPR036427 [Display all genes with this domain]
PANTHER97602Environmental Response RegulatorPTHR46136IPR052442 [Display all genes with this domain]
PROSITE profiles270351NET domainPS51525IPR027353 [Display all genes with this domain]
Pfam279341NET domainPF17035IPR027353 [Display all genes with this domain]
Gene3D274351NET domain superfamily1.20.1270.220IPR038336 [Display all genes with this domain]
CDD130227Putative transcription factor GTE, bromodomaincd05506IPR037377 [Display all genes with this domain]

Other features

Show/hide columns
  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite135
MobiDBLite491511
MobiDBLite597620
Seg480524
Ncoils470538