Transcript: AT2G44130.1 (AT2G44130-201) - Domains & features - Arabidopsis_thaliana

Description

Galactose oxidase/kelch repeat superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:819019]

Location

About this transcript

This transcript has 1 exon, is annotated with 11 domains and features, is associated with 139 variant alleles and maps to 43 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT2G44130-201	AT2G44130.1	1445	409aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178VUS0 O80582	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
CDD	19	63	-	cd22152	-
Pfam	116	286	-	PF24681	-
Pfam	21	59	F-box domain	PF00646	IPR001810 [Display all genes with this domain]
SMART	23	63	F-box domain	SM00256	IPR001810 [Display all genes with this domain]
Superfamily	19	63	F-box-like domain superfamily	SSF81383	IPR036047 [Display all genes with this domain]
PANTHER	14	408	F-box/kelch-repeat protein KMD1-4	PTHR46407	IPR044595 [Display all genes with this domain]
SMART	151	199	Kelch repeat type 1	SM00612	IPR006652 [Display all genes with this domain]
SMART	201	248	Kelch repeat type 1	SM00612	IPR006652 [Display all genes with this domain]
Gene3D	89	300	Kelch-type beta propeller	2.120.10.80	IPR015915 [Display all genes with this domain]
Superfamily	116	363	Kelch-type beta propeller	SSF117281	IPR015915 [Display all genes with this domain]

Transcript: AT2G44130.1 AT2G44130-201