Arabidopsis thaliana (TAIR10)
Description

Transducin family protein / WD-40 repeat family protein [Source:NCBI gene (formerly Entrezgene);Acc:816473]

Location
About this transcript

This transcript has 12 exons, is annotated with 24 domains and features, is associated with 254 variant alleles and maps to 44 oligo probes.

Gene

This transcript is a product of gene AT2G19540 Show transcript tableHide transcript table

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
AT2G19540-201AT2G19540.11653469aa
 
Protein coding
Q9ZUN8 -Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
PROSITE profiles265300-PS50294-
PROSITE profiles356391-PS50294-
PANTHER7461Glutamate-rich WD repeat-containingPTHR45903IPR051972 [Display all genes with this domain]
Pfam43109Histone-binding protein RBBP4, N-terminalPF12265IPR022052 [Display all genes with this domain]
SMART149188WD40 repeatSM00320IPR001680 [Display all genes with this domain]
SMART212252WD40 repeatSM00320IPR001680 [Display all genes with this domain]
SMART256298WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam265298WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles265307WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART302342WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam305340WD40 repeatPF00400IPR001680 [Display all genes with this domain]
SMART349389WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam354389WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles356398WD40 repeatPS50082IPR001680 [Display all genes with this domain]
Superfamily137451WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
Gene3D3461WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite115
MobiDBLite127
MobiDBLite119150
MobiDBLite124143
Seg622
Seg124144
Seg393401
Alphafold1469