Arabidopsis thaliana (TAIR10)
Description

RING/U-box superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:816106]

Location
About this transcript

This transcript has 7 exons, is annotated with 21 domains and features, is associated with 444 variant alleles and maps to 37 oligo probes.

Gene

This transcript is a product of gene AT2G16090 Show transcript tableHide transcript table

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
ARI2-205AT2G16090.12573593aa
 
Protein coding
A0A5S9WYM2 Q84RR2 -Ensembl Canonical
ARI2-201AT2G16090.22824533aa
 
Protein coding
A0A1P8AYS1 --
ARI2-203AT2G16090.32626547aa
 
Protein coding
A0A1P8AYL6 --
ARI2-204AT2G16090.42537587aa
 
Protein coding
A0A1P8AYS5 --
ARI2-202AT2G16090.52367487aa
 
Protein coding
A0A1P8AYL7 --

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
Superfamily119207-SSF57850-
CDD126175-cd16773-
Superfamily195263-SSF57850-
CDD202266-cd20346-
Gene3D253501-1.20.120.1750-
Superfamily276318-SSF57850-
CDD278331-cd22586-
Pfam280314-PF22191-
Pfam334592Ariadne domainPF19422IPR045840 [Display all genes with this domain]
PANTHER96363E3 ubiquitin ligase RBR familyPTHR11685IPR031127 [Display all genes with this domain]
Pfam5286E3 ubiquitin-protein ligase ARIH1-like, UBA-like domainPF21235IPR048962 [Display all genes with this domain]
Pfam195257IBR domainPF01485IPR002867 [Display all genes with this domain]
SMART195257IBR domainSM00647IPR002867 [Display all genes with this domain]
SMART266330IBR domainSM00647IPR002867 [Display all genes with this domain]
PROSITE profiles120334TRIAD supradomainPS51873IPR044066 [Display all genes with this domain]
PROSITE profiles124172Zinc finger, RING-typePS50089IPR001841 [Display all genes with this domain]
Gene3D117209Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
Seg620
Seg110125
Alphafold1593
Alphafold1593