Transcript: AT1G10570.1 (OTS2-203) - Domains & features - Arabidopsis_thaliana

Description

Cysteine proteinases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:837598]

Location

About this transcript

This transcript has 14 exons, is annotated with 10 domains and features, is associated with 382 variant alleles and maps to 43 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
OTS2-203	AT1G10570.1	1957	571aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8RWN0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
OTS2-202	AT1G10570.3	2337	440aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W346 A0A384LH87	-	-
OTS2-201	AT1G10570.2	2141	570aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W2X8	-	-

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	52	571	-	PTHR46915	-
Gene3D	325	561	-	1.10.418.20	-
Gene3D	373	500	-	3.30.310.130	-
Superfamily	331	563	Papain-like cysteine peptidase superfamily	SSF54001	IPR038765 [Display all genes with this domain]
PROSITE profiles	331	523	Ulp1 protease family, C-terminal catalytic domain	PS50600	IPR003653 [Display all genes with this domain]
Pfam	345	546	Ulp1 protease family, C-terminal catalytic domain	PF02902	IPR003653 [Display all genes with this domain]

Transcript: AT1G10570.1 OTS2-203