Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: AT3G07360.1 PUB9-201

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Description

plant U-box 9 [Source:NCBI gene (formerly Entrezgene);Acc:819924]

Location

Chromosome 3: 2,354,640-2,356,865 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 11 domains and features, is associated with 134 variant alleles and maps to 42 oligo probes.

Gene

This transcript is a product of gene AT3G07360 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
PUB9-201	AT3G07360.1	1879	460aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178VJC7 Q9SRT0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
PUB9-204	AT3G07360.5	2060	325aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-
PUB9-202	AT3G07360.4	2014	325aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-
PUB9-206	AT3G07360.6	1977	325aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-
PUB9-203	AT3G07360.3	1943	325aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-
PUB9-207	AT3G07360.7	1868	325aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-
PUB9-208	AT3G07360.2	1784	325aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-
PUB9-205	AT3G07360.8	1696	325aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-
PUB9-210	AT3G07360.9	1484	325aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-
PUB9-209	AT3G07360.10	1409	325aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-

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AlphaFold predicted model

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Ensembl protein: AT3G07360.1

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