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Select transcripts

Ensembl Plants is produced in collaboration with Gramene

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Gene: AT3G54780

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Description

Zinc finger (C3HC4-type RING finger) family protein [Source:NCBI gene (formerly Entrezgene);Acc:824643]

Location

Chromosome 3: 20,278,798-20,281,551 forward strand.

About this gene

This gene has 5 transcripts (splice variants), 355 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT3G54780-201	AT3G54780.4	2089	682aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LN98	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G54780-205	AT3G54780.1	2181	675aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7G2ERA0 F4JE23	-	-
AT3G54780-203	AT3G54780.3	2163	633aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JE22	-	-
AT3G54780-204	AT3G54780.2	2110	632aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JE24	-	-
AT3G54780-202	AT3G54780.5	2050	681aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LN99	-	-

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Transcript comparison

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