Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT5G53620

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Description

RNA polymerase II degradation factor [Source:NCBI gene (formerly Entrezgene);Acc:835444]

Gene Synonyms

MNC6.16, MNC6_16

Location

Chromosome 5: 21,780,947-21,785,287 forward strand.

About this gene

This gene has 3 transcripts (splice variants) and 171 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G53620-201	AT5G53620.2	2521	682aa	AT5G53620.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UAS7 Q93XY1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G53620-203	AT5G53620.1	2447	682aa	AT5G53620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UAS7 Q93XY1	-	-
AT5G53620-202	AT5G53620.3	2436	682aa	AT5G53620.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UAS7 Q93XY1	-	-

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Summary

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