Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT5G47800

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Description

Phototropic-responsive NPH3 family protein [Source:NCBI gene (formerly Entrezgene);Acc:834831]

Gene Synonyms

MCA23.12, MCA23_12

Location

Chromosome 5: 19,353,532-19,356,448 forward strand.

About this gene

This gene has 4 transcripts (splice variants), 163 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G47800-201	AT5G47800.2	2262	672aa	AT5G47800.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B9X9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G47800-202	AT5G47800.3	2300	559aa	AT5G47800.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9FIK1	-	-
AT5G47800-203	AT5G47800.1	2260	559aa	AT5G47800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9FIK1	-	-
AT5G47800-204	AT5G47800.4	2066	559aa	AT5G47800.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9FIK1	-	-

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Summary

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