Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT5G46500

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Description

protein VARIATION IN COMPOUND TRIGGERED ROOT growth protein [Source:NCBI gene (formerly Entrezgene);Acc:834693]

Gene Synonyms

K11I1.9, K11I1_9

Location

Chromosome 5: 18,855,955-18,858,552 forward strand.

About this gene

This gene has 4 transcripts (splice variants) and 7 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G46500-204	AT5G46500.1	1751	417aa	AT5G46500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9FHF5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G46500-201	AT5G46500.2	2292	406aa	AT5G46500.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBU6	-	-
AT5G46500-203	AT5G46500.3	1435	417aa	AT5G46500.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9FHF5	-	-
AT5G46500-202	AT5G46500.4	1312	406aa	AT5G46500.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BBU6	-	-

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Summary

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