Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: CLC-A AT5G40890

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Description

chloride channel A [Source:NCBI gene (formerly Entrezgene);Acc:834090]

Gene Synonyms

ATCLC-A, ATCLCA, CHLORIDE CHANNEL A, CHLORIDE CHANNEL-A, CLCA

Location

Chromosome 5: 16,381,314-16,385,424 reverse strand.

About this gene

This gene has 2 transcripts (splice variants), 198 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CLC-A-202	AT5G40890.1	3082	775aa	AT5G40890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9Y9U9 P92941	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CLC-A-201	AT5G40890.2	2854	643aa	AT5G40890.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4KIT3	-	-

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Summary

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