Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: SHN3 AT5G25390

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Description

Integrase-type DNA-binding superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:832611]

Gene Synonyms

F18G18.130, F18G18_130, shine2, shine3

Location

Chromosome 5: 8,820,458-8,822,062 forward strand.

About this gene

This gene has 2 transcripts (splice variants), 175 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SHN3-201	AT5G25390.2	1070	189aa	AT5G25390.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178USD7 Q3E958	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
SHN3-202	AT5G25390.1	944	186aa	AT5G25390.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

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Summary

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