Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT5G13980

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Description

Glycosyl hydrolase family 38 protein [Source:NCBI gene (formerly Entrezgene);Acc:831246]

Gene Synonyms

MAC12.38, MAC12_38

Location

Chromosome 5: 4,508,406-4,514,666 forward strand.

About this gene

This gene has 3 transcripts (splice variants), 171 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G13980-201	AT5G13980.1	3386	1024aa	AT5G13980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9Y4L9 Q8LPJ3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G13980-202	AT5G13980.2	3329	1024aa	AT5G13980.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9Y4L9 Q8LPJ3	-	-
AT5G13980-203	AT5G13980.3	3327	921aa	AT5G13980.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4K5E7	-	-

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Summary

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