Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT5G12280

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Description

SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:831103]

Location

Chromosome 5: 3,971,715-3,973,800 reverse strand.

About this gene

This gene has 3 transcripts (splice variants), 196 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G12280-203	AT5G12280.1	1260	419aa	AT5G12280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654G0M1 Q94CL4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G12280-201	AT5G12280.2	1672	181aa	AT5G12280.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178ULF0 Q5XV45	-	-
AT5G12280-202	AT5G12280.3	1322	191aa	AT5G12280.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BFH4	-	-

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Summary

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