Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT5G01780

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Description

2-oxoglutarate-dependent dioxygenase family protein [Source:NCBI gene (formerly Entrezgene);Acc:831672]

Gene Synonyms

T20L15.50, T20L15_50

Location

Chromosome 5: 302,098-304,279 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 150 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G01780-201	AT5G01780.2	1746	442aa	AT5G01780.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4KAV2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G01780-203	AT5G01780.3	2021	307aa	AT5G01780.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BHF5	-	-
AT5G01780-204	AT5G01780.4	1875	307aa	AT5G01780.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BHF5	-	-
AT5G01780-202	AT5G01780.5	1834	365aa	AT5G01780.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BHF6	-	-
AT5G01780-205	AT5G01780.1	1318	387aa	AT5G01780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4KAV1	-	-

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Summary

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