Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT3G62940

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Description

Cysteine proteinases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:825469]

Gene Synonyms

OTU5, ovarian tumor domain (OTU)-containing DUB (deubiquitilating enzyme) 5

Location

Chromosome 3: 23,262,795-23,264,731 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 176 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT3G62940-204	AT3G62940.4	1725	332aa	AT3G62940.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LMN3 Q9LYC7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G62940-203	AT3G62940.3	1501	332aa	AT3G62940.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LMN3 Q9LYC7	-	-
AT3G62940-205	AT3G62940.5	1427	316aa	AT3G62940.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384K877	-	-
AT3G62940-201	AT3G62940.2	1390	332aa	AT3G62940.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LMN3 Q9LYC7	-	-
AT3G62940-202	AT3G62940.1	1374	316aa	AT3G62940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384K877	-	-

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Summary

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