Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: SHP1 AT3G58780

.

Description

K-box region and MADS-box transcription factor family protein [Source:NCBI gene (formerly Entrezgene);Acc:825047]

Gene Synonyms

AGAMOUS-like 1, AGL1, SHATTERPROOF 1

Location

Chromosome 3: 21,738,160-21,742,517 forward strand.

About this gene

This gene has 5 transcripts (splice variants), 261 orthologues and 100 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SHP1-201	AT3G58780.4	1467	281aa	AT3G58780.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LM26	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
SHP1-203	AT3G58780.3	2148	273aa	AT3G58780.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4J705	-	-
SHP1-202	AT3G58780.1	1543	248aa	AT3G58780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LNV3 P29381 Q5XXJ3	-	-
SHP1-204	AT3G58780.2	1181	241aa	AT3G58780.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1PEE1	-	-
SHP1-205	AT3G58780.5	1014	254aa	AT3G58780.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LM27	-	-

.

Summary

.

.