Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT3G55080

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Description

SET domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:824674]

Location

Chromosome 3: 20,411,342-20,416,043 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 120 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT3G55080-202	AT3G55080.1	1739	463aa	AT3G55080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9XMM6 Q5PP40	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G55080-201	AT3G55080.3	1644	379aa	AT3G55080.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LQC8	-	-
AT3G55080-203	AT3G55080.4	1550	348aa	AT3G55080.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LQC7	-	-
AT3G55080-204	AT3G55080.5	1490	379aa	AT3G55080.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LQC8	-	-
AT3G55080-205	AT3G55080.2	1480	353aa	AT3G55080.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q67YE9	-	-

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Summary

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