Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: AT3G54980

.

Description

Pentatricopeptide repeat (PPR) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:824663]

Gene Synonyms

T15C9.5

Location

Chromosome 3: 20,370,205-20,374,261 forward strand.

About this gene

This gene has 2 transcripts (splice variants), 136 orthologues and 460 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT3G54980-202	AT3G54980.2	3844	851aa	AT3G54980.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9SV46	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G54980-201	AT3G54980.1	2870	851aa	AT3G54980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9SV46	-	-

.

Summary

.

.