Description
Putative eukaryotic LigT [Source:NCBI gene (formerly Entrezgene);Acc:820869]
Location
Chromosome 3: 5,500,054-5,503,573 forward strand.
About this gene
This gene has 13 transcripts (splice variants), 148 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| AT3G16230-201 | AT3G16230.1 | 1911 | 449aa | AT3G16230.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A384KSP6 F4J1H2 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| AT3G16230-204 | AT3G16230.4 | 2140 | 372aa | AT3G16230.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1I9LN58 | - | - |
| AT3G16230-208 | AT3G16230.7 | 2067 | 372aa | AT3G16230.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1I9LN58 | - | - |
| AT3G16230-202 | AT3G16230.5 | 2034 | 379aa | AT3G16230.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1I9LN59 | - | - |
| AT3G16230-203 | AT3G16230.6 | 2017 | 372aa | AT3G16230.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1I9LN58 | - | - |
| AT3G16230-207 | AT3G16230.8 | 1961 | 379aa | AT3G16230.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1I9LN59 | - | - |
| AT3G16230-206 | AT3G16230.9 | 1944 | 372aa | AT3G16230.9 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1I9LN58 | - | - |
| AT3G16230-210 | AT3G16230.2 | 1897 | 449aa | AT3G16230.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A384KSP6 F4J1H2 | - | - |
| AT3G16230-211 | AT3G16230.11 | 1851 | 379aa | AT3G16230.11 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1I9LN59 | - | - |
| AT3G16230-205 | AT3G16230.10 | 1838 | 449aa | AT3G16230.10 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A384KSP6 F4J1H2 | - | - |
| AT3G16230-209 | AT3G16230.3 | 1710 | 409aa | AT3G16230.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1I9LN63 | - | - |
| AT3G16230-212 | AT3G16230.12 | 1704 | 409aa | AT3G16230.12 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1I9LN63 | - | - |
| AT3G16230-213 | AT3G16230.13 | 1412 | 325aa | AT3G16230.13 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1I9LN64 | - | - |
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