Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PUB9 AT3G07360

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Description

plant U-box 9 [Source:NCBI gene (formerly Entrezgene);Acc:819924]

Gene Synonyms

ARABIDOPSIS THALIANA PLANT U-BOX 9, ATPUB9, plant U-box 9

Location

Chromosome 3: 2,354,640-2,356,884 forward strand.

About this gene

This gene has 10 transcripts (splice variants), 198 orthologues and 46 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
PUB9-201	AT3G07360.1	1879	460aa	AT3G07360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178VJC7 Q9SRT0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
PUB9-204	AT3G07360.5	2060	325aa	AT3G07360.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-
PUB9-202	AT3G07360.4	2014	325aa	AT3G07360.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-
PUB9-206	AT3G07360.6	1977	325aa	AT3G07360.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-
PUB9-203	AT3G07360.3	1943	325aa	AT3G07360.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-
PUB9-207	AT3G07360.7	1868	325aa	AT3G07360.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-
PUB9-208	AT3G07360.2	1784	325aa	AT3G07360.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-
PUB9-205	AT3G07360.8	1696	325aa	AT3G07360.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-
PUB9-210	AT3G07360.9	1484	325aa	AT3G07360.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-
PUB9-209	AT3G07360.10	1409	325aa	AT3G07360.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L554 Q3EBB0	-	-

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Summary

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