Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: PSF1 AT1G80190

.

Description

partner of SLD five 1 [Source:NCBI gene (formerly Entrezgene);Acc:844359]

Gene Synonyms

F18B13.27, F18B13_27, partner of SLD five 1

Location

Chromosome 1: 30,158,923-30,161,829 forward strand.

About this gene

This gene has 6 transcripts (splice variants) and 168 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
PSF1-205	AT1G80190.5	1498	207aa	AT1G80190.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AW53	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
PSF1-202	AT1G80190.2	1840	152aa	AT1G80190.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AW89	-	-
PSF1-204	AT1G80190.4	1769	201aa	AT1G80190.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384KWN4 Q9SSC0	-	-
PSF1-203	AT1G80190.1	1662	201aa	AT1G80190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384KWN4 Q9SSC0	-	-
PSF1-201	AT1G80190.3	1504	201aa	AT1G80190.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384KWN4 Q9SSC0	-	-
PSF1-206	AT1G80190.6	1472	201aa	AT1G80190.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384KWN4 Q9SSC0	-	-

.

Summary

.

.