Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT1G12400

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Description

Nucleotide excision repair, TFIIH, subunit TTDA [Source:NCBI gene (formerly Entrezgene);Acc:837795]

Gene Synonyms

F5O11.12, F5O11_12

Location

Chromosome 1: 4,221,779-4,222,875 forward strand.

About this gene

This gene has 3 transcripts (splice variants), 151 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G12400-203	AT1G12400.3	763	77aa	AT1G12400.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AR18	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G12400-201	AT1G12400.1	729	71aa	AT1G12400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WKZ4 Q6NNM0	-	-
AT1G12400-202	AT1G12400.2	653	71aa	AT1G12400.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WKZ4 Q6NNM0	-	-

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Summary

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