Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: SPI AT1G03060

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Description

BEACH-DOMAIN HOMOLOG A1 [Source:NCBI gene (formerly Entrezgene);Acc:839323]

Gene Synonyms

F10O3.12, F10O3_12, SPIRRIG

Location

Chromosome 1: 712,440-727,553 reverse strand.

About this gene

This gene has 4 transcripts (splice variants), 174 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SPI-203	AT1G03060.1	11304	3601aa	AT1G03060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4HZB2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
SPI-201	AT1G03060.2	11983	3600aa	AT1G03060.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W7I4 A0A384L2B6	-	-
SPI-202	AT1G03060.3	11892	3571aa	AT1G03060.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AT19	-	-
SPI-204	AT1G03060.4	11483	3572aa	AT1G03060.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AT16	-	-

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Summary

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