Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT1G01880

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Description

5'-3' exonuclease family protein [Source:NCBI gene (formerly Entrezgene);Acc:837373]

Gene Synonyms

AtGEN1, F22M8.2, F22M8_2, GEN1, ortholog of HsGEN1

Location

Chromosome 1: 306,467-309,541 reverse strand.

About this gene

This gene has 4 transcripts (splice variants), 135 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G01880-201	AT1G01880.3	2134	599aa	AT1G01880.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WE55 Q9LPD2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G01880-203	AT1G01880.1	2107	599aa	AT1G01880.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WE55 Q9LPD2	-	-
AT1G01880-202	AT1G01880.2	1993	598aa	AT1G01880.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4HU71	-	-
AT1G01880-204	AT1G01880.4	1634	541aa	AT1G01880.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8APG4	-	-

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Summary

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