Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT5G55550

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Description

RNA-binding (RRM/RBD/RNP motifs) family protein [Source:NCBI gene (formerly Entrezgene);Acc:835649]

Gene Synonyms

MTE17.27, MTE17_27

Location

Chromosome 5: 22,501,535-22,504,144 reverse strand.

About this gene

This gene has 11 transcripts (splice variants), 248 orthologues and 56 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G55550-210	AT5G55550.10	1834	507aa	AT5G55550.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BF26	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G55550-207	AT5G55550.2	2327	460aa	AT5G55550.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q949Z3	-	-
AT5G55550-205	AT5G55550.6	2288	460aa	AT5G55550.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q949Z3	-	-
AT5G55550-206	AT5G55550.7	2233	448aa	AT5G55550.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384KLV2 F4K4W6	-	-
AT5G55550-202	AT5G55550.3	2233	460aa	AT5G55550.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q949Z3	-	-
AT5G55550-203	AT5G55550.5	2226	448aa	AT5G55550.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384KLV2 F4K4W6	-	-
AT5G55550-201	AT5G55550.1	2208	448aa	AT5G55550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384KLV2 F4K4W6	-	-
AT5G55550-204	AT5G55550.4	1981	448aa	AT5G55550.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384KLV2 F4K4W6	-	-
AT5G55550-209	AT5G55550.8	1924	495aa	AT5G55550.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BF50	-	-
AT5G55550-208	AT5G55550.9	1863	448aa	AT5G55550.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384KLV2 F4K4W6	-	-
AT5G55550-211	AT5G55550.11	1773	460aa	AT5G55550.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q949Z3	-	-

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Summary

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