Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: SPDS3 AT5G53120

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Description

spermidine synthase 3 [Source:NCBI gene (formerly Entrezgene);Acc:835392]

Gene Synonyms

ATSPDS3, MFH8.5, MFH8_5, SPERMIDINE SYNTHASE 3, SPMS

Location

Chromosome 5: 21,534,473-21,537,816 forward strand.

About this gene

This gene has 7 transcripts (splice variants), 216 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SPDS3-201	AT5G53120.6	1596	386aa	AT5G53120.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4KJ05	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
SPDS3-202	AT5G53120.1	1521	359aa	AT5G53120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654GAT1 Q94BN2	-	-
SPDS3-203	AT5G53120.2	1508	359aa	AT5G53120.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654GAT1 Q94BN2	-	-
SPDS3-205	AT5G53120.3	1461	359aa	AT5G53120.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654GAT1 Q94BN2	-	-
SPDS3-206	AT5G53120.4	1422	359aa	AT5G53120.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654GAT1 Q94BN2	-	-
SPDS3-207	AT5G53120.5	1327	359aa	AT5G53120.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654GAT1 Q94BN2	-	-
SPDS3-204	AT5G53120.7	1292	376aa	AT5G53120.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1R7T3F8	-	-

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Summary

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