Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT5G49470

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Description

PAS domain-containing protein tyrosine kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:835007]

Gene Synonyms

K7J8.16, K7J8_16, RAF10

Location

Chromosome 5: 20,063,331-20,068,793 forward strand.

About this gene

This gene has 7 transcripts (splice variants), 104 orthologues and 52 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G49470-207	AT5G49470.2	3018	831aa	AT5G49470.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4K645	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G49470-203	AT5G49470.5	3361	697aa	AT5G49470.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BE34	-	-
AT5G49470-202	AT5G49470.1	3152	483aa	AT5G49470.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4K647	-	-
AT5G49470-201	AT5G49470.3	3080	770aa	AT5G49470.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UGB9 F4K644	-	-
AT5G49470-205	AT5G49470.7	2994	643aa	AT5G49470.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BE48	-	-
AT5G49470-204	AT5G49470.6	2975	700aa	AT5G49470.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BE22	-	-
AT5G49470-206	AT5G49470.4	2757	744aa	AT5G49470.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4K646	-	-

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Summary

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