Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: IRX6 AT5G15630

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Description

COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family [Source:NCBI gene (formerly Entrezgene);Acc:831417]

Gene Synonyms

COBL4, COBRA-LIKE4, F14F8.10, F14F8_10, IRREGULAR XYLEM 6

Location

Chromosome 5: 5,084,524-5,086,811 forward strand.

About this gene

This gene has 5 transcripts (splice variants), 193 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
IRX6-201	AT5G15630.1	1880	431aa	AT5G15630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9Y4Z5 Q9LFW3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
IRX6-202	AT5G15630.2	1946	382aa	AT5G15630.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BE86	-	-
IRX6-203	AT5G15630.3	1855	395aa	AT5G15630.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UK60 A0A384LH43	-	-
IRX6-204	AT5G15630.4	1837	382aa	AT5G15630.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BE86	-	-
IRX6-205	AT5G15630.5	1208	341aa	AT5G15630.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BE64	-	-

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Summary

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