Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT3G54940

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Description

Papain family cysteine protease [Source:NCBI gene (formerly Entrezgene);Acc:824659]

Location

Chromosome 3: 20,354,351-20,356,363 forward strand.

About this gene

This gene has 2 transcripts (splice variants), 135 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT3G54940-202	AT3G54940.2	1391	367aa	AT3G54940.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V5N1 Q8VYS0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G54940-201	AT3G54940.3	1447	280aa	AT3G54940.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LTT3	-	-

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Summary

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