Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT3G50380

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Description

vacuolar protein sorting-associated protein, putative (DUF1162) [Source:NCBI gene (formerly Entrezgene);Acc:824202]

Location

Chromosome 3: 18,686,368-18,700,710 reverse strand.

About this gene

This gene has 4 transcripts (splice variants) and 115 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT3G50380-202	AT3G50380.2	9735	3132aa	AT3G50380.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LQ65	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G50380-204	AT3G50380.4	9582	3125aa	AT3G50380.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LQ67	-	-
AT3G50380-201	AT3G50380.3	9484	2461aa	AT3G50380.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LQ66	-	-
AT3G50380-203	AT3G50380.1	9303	3072aa	AT3G50380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4J0L9	-	-

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Summary

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